RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 ERVH48-1M5A8F1 160 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 CACNB4O00305 520 aaPredicted RBP8.17□□□□□ -1.1
TPM3-203ENST00000312970 PDE2AO00408 941 aaPredicted RBP8.17□□□□□ -1.1
TPM3-203ENST00000312970 DDX3XO00571 662 aaKnown RBP eCLIP8.17□□□□□ -1.1
TPM3-203ENST00000312970 TRAFD1O14545 582 aaPredicted RBP8.17□□□□□ -1.1
TPM3-203ENST00000312970 TNFRSF10CO14798 259 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 CASC3O15234 703 aaKnown RBP8.17□□□□□ -1.1
TPM3-203ENST00000312970 NDUFB5O43674 189 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 LRCH4O75427 683 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 TNFSF15O95150 251 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 NUDT7P0C024 238 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 ELFN1P0C7U0 828 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 MYBL1P10243 752 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 KELP23276 732 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 PCK1P35558 622 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 ARL4AP40617 200 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 KIAA1024LP59773 190 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 AP1S1P61966 158 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 CCL7P80098 99 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 SKOR1P84550 965 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 FANCCQ00597 558 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 RHDQ02161 417 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 CFHR1Q03591 330 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 SLC10A7Q0GE19 358 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 RALGDSQ12967 914 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 DPYSQ14117 519 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 ACOX1Q15067 660 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 TCEA2Q15560 299 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 ARHGAP40Q5TG30 622 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 PNCKQ6P2M8 343 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 OGFOD3Q6PK18 319 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 ARHGAP36Q6ZRI8 547 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 CYP4V2Q6ZWL3 525 aaPredicted RBP8.17□□□□□ -1.1
TPM3-203ENST00000312970 DPPA4Q7L190 304 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 TAF8Q7Z7C8 310 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 NPWQ8N729 165 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 KYQ8NBH2 561 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 FAM46DQ8NEK8 389 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 GPR156Q8NFN8 814 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 FUBP1Q96AE4 644 aaKnown RBP8.17□□□□□ -1.1
TPM3-203ENST00000312970 CCDC74AQ96AQ1 378 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 ZNF653Q96CK0 615 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 WBP1Q96G27 269 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 LIN37Q96GY3 246 aaPredicted RBP8.17□□□□□ -1.1
TPM3-203ENST00000312970 NAP1L5Q96NT1 182 aaPredicted RBP8.17□□□□□ -1.1
TPM3-203ENST00000312970 GFM1Q96RP9 751 aaKnown RBP8.17□□□□□ -1.1
TPM3-203ENST00000312970 TRIM7Q9C029 511 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 ISCUQ9H1K1 167 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 ACBD3Q9H3P7 528 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 SYNDIG1Q9H7V2 258 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 CPNE5Q9HCH3 593 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 KCTD5Q9NXV2 234 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 TMEM63CQ9P1W3 806 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 MYO1AQ9UBC5 1043 aa8.17□□□□□ -1.1
TPM3-203ENST00000312970 COL27A1Q8IZC6 1860 aaPredicted RBP8.17□□□□□ -1.1
TPM3-203ENST00000312970 A0A1B0GTH6 734 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 TTC24A2A3L6 582 aaPredicted RBP8.16□□□□□ -1.1
TPM3-203ENST00000312970 CAPN8A6NHC0 703 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 ARHGAP6O43182 974 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 HTRA2O43464 458 aaPredicted RBP8.16□□□□□ -1.1
TPM3-203ENST00000312970 SERPINC1P01008 464 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 RPLP0P05388 317 aaKnown RBP8.16□□□□□ -1.1
TPM3-203ENST00000312970 ITGA2BP08514 1039 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 SKILP12757 684 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 PNLIPP16233 465 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 GLB1P16278 677 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 AMPD1P23109 780 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 NFKBIAP25963 317 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 HSPA9P38646 679 aaKnown RBP8.16□□□□□ -1.1
TPM3-203ENST00000312970 ZNF165P49910 485 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 EIF3IQ13347 325 aaKnown RBP8.16□□□□□ -1.1
TPM3-203ENST00000312970 PIGHQ14442 188 aaPredicted RBP8.16□□□□□ -1.1
TPM3-203ENST00000312970 ZNF235Q14590 738 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 NR1I3Q14994 352 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 DPYSL2Q16555 572 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 TAF1BQ53T94 588 aaPredicted RBP8.16□□□□□ -1.1
TPM3-203ENST00000312970 SWT1Q5T5J6 900 aaKnown RBP8.16□□□□□ -1.1
TPM3-203ENST00000312970 TMCO3Q6UWJ1 677 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 NYAP1Q6ZVC0 841 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 RAB11FIP2Q7L804 512 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 POLNQ7Z5Q5 900 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 CLEC14AQ86T13 490 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 TP53INP2Q8IXH6 220 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 BBS5Q8N3I7 341 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 FBXO39Q8N4B4 442 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 NSMCE1Q8WV22 266 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 SNRNP27Q8WVK2 155 aaKnown RBP8.16□□□□□ -1.1
TPM3-203ENST00000312970 OR1E3Q8WZA6 343 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 COQ10AQ96MF6 247 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 NSMCE3Q96MG7 304 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 TMEM74Q96NL1 305 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 NUDCD1Q96RS6 583 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 LGR4Q9BXB1 951 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 RBCK1Q9BYM8 510 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 STRADBQ9C0K7 418 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 LRRN3Q9H3W5 708 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 CYP4F12Q9HCS2 524 aa8.16□□□□□ -1.1
TPM3-203ENST00000312970 MRPL40Q9NQ50 206 aaKnown RBP8.16□□□□□ -1.1
TPM3-203ENST00000312970 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.16□□□□□ -1.1
TPM3-203ENST00000312970 RABGEF1Q9UJ41 708 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms