RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 ECDO95905 644 aaPredicted RBP13.19□□□□□ -0.3
SNED1-201ENST00000310397 NTRK1P04629 796 aa13.19□□□□□ -0.3
SNED1-201ENST00000310397 TEX44Q53QW1 395 aa13.19□□□□□ -0.3
SNED1-201ENST00000310397 BCKDKO14874 412 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 LIN54Q6MZP7 749 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 OR4L1Q8NH43 312 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 MTFMTQ96DP5 389 aaKnown RBP13.18□□□□□ -0.3
SNED1-201ENST00000310397 SLC9A8Q9Y2E8 581 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 DERAQ9Y315 318 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 CYP2A13Q16696 494 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 C10orf82Q8WW14 230 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 LENG8Q96PV6 779 aaPredicted RBP13.18□□□□□ -0.3
SNED1-201ENST00000310397 KIFC1Q9BW19 673 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 ASB8Q9H765 288 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 MOV10Q9HCE1 1003 aaKnown RBP13.18□□□□□ -0.3
SNED1-201ENST00000310397 CCDC59Q9P031 241 aaKnown RBP13.18□□□□□ -0.3
SNED1-201ENST00000310397 ITGAXP20702 1163 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 MPSTP25325 297 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 CYP4F2P78329 520 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 CYP4F3Q08477 520 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 ARL13AQ5H913 290 aaPredicted RBP13.18□□□□□ -0.3
SNED1-201ENST00000310397 CELF3Q5SZQ8 465 aaKnown RBP13.18□□□□□ -0.3
SNED1-201ENST00000310397 ANXA8L1Q5VT79 327 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 DCLRE1AQ6PJP8 1040 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 VN1R5Q7Z5H4 357 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 SATL1Q86VE3 508 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 CRISPLD1Q9H336 500 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 CAPN10Q9HC96 672 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 STOML2Q9UJZ1 356 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 SRP54P61011 504 aaKnown RBP13.18□□□□□ -0.3
SNED1-201ENST00000310397 TUBA4AP68366 448 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 ITGA7Q13683 1181 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 DACT2Q5SW24 774 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 SLC16A10Q8TF71 515 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 ALG2Q9H553 416 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 A0A088AWK7 358 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 CCNKO75909 580 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 AP2A1O95782 977 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 ZNF10P21506 573 aaPredicted RBP13.18□□□□□ -0.3
SNED1-201ENST00000310397 ATP5C1P36542 298 aaKnown RBP13.18□□□□□ -0.3
SNED1-201ENST00000310397 RPS9P46781 194 aaKnown RBP13.18□□□□□ -0.3
SNED1-201ENST00000310397 AQP4P55087 323 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 MRPS5P82675 430 aaKnown RBP13.18□□□□□ -0.3
SNED1-201ENST00000310397 SREBF2Q12772 1141 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 PTPN20Q4JDL3 420 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 ACSBG2Q5FVE4 666 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 GALNT18Q6P9A2 607 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 MINDY2Q8NBR6 621 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 FAXDC2Q96IV6 333 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 KLHL32Q96NJ5 620 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 DUSP16Q9BY84 665 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 TSPAN3O60637 253 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 POMCP01189 267 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 TCF4P15884 667 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 LIMK2P53671 638 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 SAPCD2Q86UD0 394 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 GRPEL2Q8TAA5 225 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 ZNF317Q96PQ6 595 aaPredicted RBP13.18□□□□□ -0.3
SNED1-201ENST00000310397 ZNF607Q96SK3 696 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 PLK2Q9NYY3 685 aa13.18□□□□□ -0.3
SNED1-201ENST00000310397 HOXA10P31260 410 aaPredicted RBP13.17□□□□□ -0.3
SNED1-201ENST00000310397 POLR2JP52435 117 aaKnown RBP13.17□□□□□ -0.3
SNED1-201ENST00000310397 NBPF12Q5TAG4 269 aaPredicted RBP13.17□□□□□ -0.3
SNED1-201ENST00000310397 LCLAT1Q6UWP7 414 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 TRAPPC12Q8WVT3 735 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 ADI1Q9BV57 179 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 TAS2R1Q9NYW7 299 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 COMMD9Q9P000 198 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 ARID1BQ8NFD5 2236 aaPredicted RBP13.17□□□□□ -0.3
SNED1-201ENST00000310397 PAPSS1O43252 624 aaPredicted RBP13.17□□□□□ -0.3
SNED1-201ENST00000310397 CHRNGP07510 517 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 HTR7P34969 479 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 CNTN2Q02246 1040 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 COL9A3Q14050 684 aaPredicted RBP13.17□□□□□ -0.3
SNED1-201ENST00000310397 GK5Q6ZS86 529 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 CXXC5Q7LFL8 322 aaKnown RBP13.17□□□□□ -0.3
SNED1-201ENST00000310397 ERI1Q8IV48 349 aaKnown RBP13.17□□□□□ -0.3
SNED1-201ENST00000310397 CDT1Q9H211 546 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 SERPINB7O75635 380 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 DHFRP00374 187 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 PRG2P13727 222 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 MYL9P24844 172 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 NTSP30990 170 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 SPIBQ01892 262 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 C12orf29Q8N999 325 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 ZFP28Q8NHY6 868 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 SEMA3CQ99985 751 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 WDR55Q9H6Y2 383 aaPredicted RBP13.17□□□□□ -0.3
SNED1-201ENST00000310397 BTRCQ9Y297 605 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 ANKDD1BA6NHY2 528 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 THRBP10828 461 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 RPL9P32969 192 aaKnown RBP13.17□□□□□ -0.3
SNED1-201ENST00000310397 CLK2P49760 499 aaKnown RBP13.17□□□□□ -0.3
SNED1-201ENST00000310397 GSCP56915 257 aaPredicted RBP13.17□□□□□ -0.3
SNED1-201ENST00000310397 ELP6Q0PNE2 266 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 ASTE1Q2TB18 679 aaPredicted RBP13.17□□□□□ -0.3
SNED1-201ENST00000310397 SETMARQ53H47 684 aaPredicted RBP13.17□□□□□ -0.3
SNED1-201ENST00000310397 EGFLAMQ63HQ2 1017 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 KRT77Q7Z794 578 aa13.17□□□□□ -0.3
SNED1-201ENST00000310397 CSPG4P5Q96PW8 444 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms