RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 PKN3Q6P5Z2 889 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 XKR5Q6UX68 686 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 MFSD7Q6UXD7 560 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 SYT13Q7L8C5 426 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 TRMT11Q7Z4G4 463 aaKnown RBP8.32□□□□□ -1.08
CHD6-201ENST00000309279 ARHGAP12Q8IWW6 846 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 NPWQ8N729 165 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 PQLC3Q8N755 202 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 ANKRD53Q8N9V6 530 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 BBOF1Q8ND07 529 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 OR7D4Q8NG98 312 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 RPLP0P6Q8NHW5 317 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 SORCS1Q8WY21 1168 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 ALG3Q92685 438 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 ARL8AQ96BM9 186 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 VPS39Q96JC1 886 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 MRGPRX3Q96LB0 322 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 CLUHP3Q96NS8 147 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 ALS2CR12Q96Q35 445 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 TMEM237Q96Q45 408 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 ACOX2Q99424 681 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 GABRG3Q99928 467 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 SH3GL3Q99963 347 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 TMEM245Q9H330 911 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 ETNK2Q9NVF9 386 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 ERVW-1Q9UQF0 538 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 HS3ST2Q9Y278 367 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 NYNRINQ9P2P1 1898 aaKnown RBP8.31□□□□□ -1.08
CHD6-201ENST00000309279 VPS13AQ96RL7 3174 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 GOLGA6L9A6NEM1 432 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 KDELR3O43731 214 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 DIAPH2O60879 1101 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 KCNJ13O60928 360 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 SIN3BO75182 1162 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 PAPSS2O95340 614 aaPredicted RBP8.31□□□□□ -1.08
CHD6-201ENST00000309279 FTCDO95954 541 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 CD160O95971 181 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 RPSAP08865 295 aaKnown RBP8.31□□□□□ -1.08
CHD6-201ENST00000309279 NOS3P29474 1203 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 PTPN7P35236 360 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 SERPINB6P35237 376 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 ACVRL1P37023 503 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 IL12RB1P42701 662 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 CTSOP43234 321 aaPredicted RBP8.31□□□□□ -1.08
CHD6-201ENST00000309279 ARF5P84085 180 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 HS1BP3Q53T59 392 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 ODF2Q5BJF6 829 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 NCBP2-AS2Q69YL0 99 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 KRT74Q7RTS7 529 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 HEATR4Q86WZ0 1026 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 ALLCQ8N6M5 410 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 UBL4BQ8N7F7 174 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 PLD5Q8N7P1 536 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 TXNDC5Q8NBS9 432 aaKnown RBP8.31□□□□□ -1.08
CHD6-201ENST00000309279 ZBTB44Q8NCP5 570 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 CYB5D2Q8WUJ1 264 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 HMCESQ96FZ2 354 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 ZNF845Q96IR2 970 aaPredicted RBP8.31□□□□□ -1.08
CHD6-201ENST00000309279 RBM41Q96IZ5 413 aaKnown RBP8.31□□□□□ -1.08
CHD6-201ENST00000309279 C16orf45Q96MC5 204 aaPredicted RBP8.31□□□□□ -1.08
CHD6-201ENST00000309279 LRFN3Q9BTN0 628 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 SLC39A8Q9C0K1 460 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 ITM2CQ9NQX7 267 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 VPS51Q9UID3 782 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 SLCO3A1Q9UIG8 710 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 MMP17Q9ULZ9 603 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 PACSIN2Q9UNF0 486 aaPredicted RBP8.31□□□□□ -1.08
CHD6-201ENST00000309279 LRCH1Q9Y2L9 728 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 MFHAS1Q9Y4C4 1052 aa8.31□□□□□ -1.08
CHD6-201ENST00000309279 hCG_1818297A0A087WSY0 165 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 A0A1W2PQF6 199 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 ZSCAN5CA6NGD5 496 aaPredicted RBP8.3□□□□□ -1.08
CHD6-201ENST00000309279 ARHGAP42A6NI28 874 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 USP27XA6NNY8 438 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 WASH3PC4AMC7 463 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 CBX4O00257 560 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 TPP1O14773 563 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 MTSS1O43312 755 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 SNAP91O60641 907 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 KLF8O95600 359 aaPredicted RBP8.3□□□□□ -1.08
CHD6-201ENST00000309279 MT-CO1P00395 513 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 OPN1MWP04001 364 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 OPN1MW2P0DN77 364 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 OPN1MW3P0DN78 364 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 PYGMP11217 842 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 ZFXP17010 805 aaPredicted RBP8.3□□□□□ -1.08
CHD6-201ENST00000309279 GLDCP23378 1020 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 ACTN2P35609 894 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 ALDH3A2P51648 485 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 SLC26A5P58743 744 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 TUBA1BP68363 451 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 GUCA2AQ02747 115 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 ACY1Q03154 408 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 CRY1Q16526 586 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 BBS9Q3SYG4 887 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 EOGTQ5NDL2 527 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 DCAF12L1Q5VU92 463 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 ARHGAP11AQ6P4F7 1023 aa8.3□□□□□ -1.08
CHD6-201ENST00000309279 SHQ1Q6PI26 577 aaKnown RBP8.3□□□□□ -1.08
CHD6-201ENST00000309279 CORO6Q6QEF8 472 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms