RNA–Protein interactions for RNA: ENST00000304743.6

PCNX1-201, Transcript of pecanex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNX1, Length 12,919 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-201ENST00000304743 TRAPPC12Q8WVT3 735 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 ZNF558Q96NG5 402 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 TMEM74Q96NL1 305 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 SLC39A3Q9BRY0 314 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 A0A087X0B3 334 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 H3BRB1 525 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 SNAP23O00161 211 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 PER2O15055 1255 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 PCDHGA12O60330 932 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 KLHL41O60662 606 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 VMACQ2NL98 169 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 QRICH1Q2TAL8 776 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 AMZ1Q400G9 498 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 POTEHQ6S545 545 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 C4orf33Q8N1A6 199 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 FBXO22Q8NEZ5 403 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 TUBGCP5Q96RT8 1024 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 TDRD1Q9BXT4 1180 aaKnown RBP8.09□□□□□ -1.11
PCNX1-201ENST00000304743 BATF3Q9NR55 127 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 BTBD17A6NE02 478 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 WFS1O76024 890 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 ALOX5P09917 674 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 FMO5P49326 533 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 PCID2Q5JVF3 399 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 FNBP1LQ5T0N5 605 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 TFAP2DQ7Z6R9 452 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 C12orf40Q86WS4 652 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 SCGB1C1Q8TD33 95 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 PGLYRP2Q96PD5 576 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 FN3KQ9H479 309 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 ANTXR1Q9H6X2 564 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 E7ENQ6 273 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 E7EQ34 232 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 E7ESA3 106 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 UGT2B11O75310 529 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 TPPPO94811 219 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 THRBP10828 461 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 FDPSP14324 419 aaKnown RBP8.09□□□□□ -1.11
PCNX1-201ENST00000304743 HDCP19113 662 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 HOXC8P31273 242 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 HCAR3P49019 387 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 EN1Q05925 392 aaPredicted RBP8.09□□□□□ -1.11
PCNX1-201ENST00000304743 FRG1Q14331 258 aaKnown RBP8.09□□□□□ -1.11
PCNX1-201ENST00000304743 POU6F1Q14863 301 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 PRSS58Q8IYP2 241 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 TCTEX1D2Q8WW35 142 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 NEDD4LQ96PU5 975 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 TRIM9Q9C026 710 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 ZNF355PQ9NSJ1 428 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 NDUFA13Q9P0J0 144 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 IL20RAQ9UHF4 553 aa8.09□□□□□ -1.11
PCNX1-201ENST00000304743 CPED1A4D0V7 1026 aa8.09□□□□□ -1.12
PCNX1-201ENST00000304743 AP2A1O95782 977 aa8.09□□□□□ -1.12
PCNX1-201ENST00000304743 ZNF155Q12901 538 aaPredicted RBP8.09□□□□□ -1.12
PCNX1-201ENST00000304743 SWT1Q5T5J6 900 aaKnown RBP8.09□□□□□ -1.12
PCNX1-201ENST00000304743 SLC8B1Q6J4K2 584 aa8.09□□□□□ -1.12
PCNX1-201ENST00000304743 ZNF730Q6ZMV8 503 aa8.09□□□□□ -1.12
PCNX1-201ENST00000304743 ATG10Q9H0Y0 220 aa8.09□□□□□ -1.12
PCNX1-201ENST00000304743 ALG2Q9H553 416 aa8.09□□□□□ -1.12
PCNX1-201ENST00000304743 ZMYM2Q9UBW7 1377 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 SLC25A14O95258 325 aaPredicted RBP8.08□□□□□ -1.12
PCNX1-201ENST00000304743 DDX6P26196 483 aaKnown RBP eCLIP8.08□□□□□ -1.12
PCNX1-201ENST00000304743 ARPC4P59998 168 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 SLC13A2Q13183 592 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 PUM1Q14671 1186 aaKnown RBP eCLIP8.08□□□□□ -1.12
PCNX1-201ENST00000304743 PLEKHH3Q7Z736 793 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 LDHDQ86WU2 507 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 HID1Q8IV36 788 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 SOCS4Q8WXH5 440 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 MAGEB18Q96M61 343 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 RAB9BQ9NP90 201 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 RBM22Q9NW64 420 aaKnown RBP eCLIP8.08□□□□□ -1.126e-9■■■■■ 47.5
PCNX1-201ENST00000304743 RRN3Q9NYV6 651 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 A6NLC8 198 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 OGTO15294 1046 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 SSX4O60224 188 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 CPNE6O95741 557 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 CTHP32929 405 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 MRPS25P82663 173 aaKnown RBP8.08□□□□□ -1.12
PCNX1-201ENST00000304743 APTXQ7Z2E3 356 aaKnown RBP8.08□□□□□ -1.12
PCNX1-201ENST00000304743 ERO1BQ86YB8 467 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 OR56B2PQ8NGI1 322 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 OR52K2Q8NGK3 314 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 EQTNQ9NQ60 294 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 SDHAF3Q9NRP4 125 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 TBX20Q9UMR3 447 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 PCDHGB7Q9Y5F8 929 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 PCDHGB2Q9Y5G2 931 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 ANKRD33BA6NCL7 494 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 LRRC72A6NJI9 287 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 M0R036 132 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 M0R2N6 131 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 ANKRD28O15084 1053 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 ATG13O75143 517 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 UGT1A1P22309 533 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 BAATQ14032 418 aaPredicted RBP8.08□□□□□ -1.12
PCNX1-201ENST00000304743 STRA8Q7Z7C7 330 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 Q8N402 240 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 C9orf72Q96LT7 481 aa8.08□□□□□ -1.12
PCNX1-201ENST00000304743 LRFN5Q96NI6 719 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms