RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.43■□□□□ 0.7
HOXC4-201ENST00000303406 CCDC189A1A4V9 331 aa19.43■□□□□ 0.7
HOXC4-201ENST00000303406 GLUD1P00367 558 aa19.43■□□□□ 0.7
HOXC4-201ENST00000303406 PDHA1P08559 390 aa19.43■□□□□ 0.7
HOXC4-201ENST00000303406 SPATA31D3P0C874 917 aa19.43■□□□□ 0.7
HOXC4-201ENST00000303406 CCND1P24385 295 aa19.43■□□□□ 0.7
HOXC4-201ENST00000303406 MNAT1P51948 309 aa19.43■□□□□ 0.7
HOXC4-201ENST00000303406 PGGT1BP53609 377 aa19.43■□□□□ 0.7
HOXC4-201ENST00000303406 EPHA5P54756 1037 aa19.43■□□□□ 0.7
HOXC4-201ENST00000303406 NFKB2Q00653 900 aa19.43■□□□□ 0.7
HOXC4-201ENST00000303406 SEMA3AQ14563 771 aa19.43■□□□□ 0.7
HOXC4-201ENST00000303406 DNAL1Q4LDG9 190 aa19.43■□□□□ 0.7
HOXC4-201ENST00000303406 SEL1L3Q68CR1 1132 aa19.43■□□□□ 0.7
HOXC4-201ENST00000303406 SPATA31D4Q6ZUB0 917 aa19.43■□□□□ 0.7
HOXC4-201ENST00000303406 LSMEM2Q8N112 164 aa19.43■□□□□ 0.7
HOXC4-201ENST00000303406 TEX9Q8N6V9 391 aa19.43■□□□□ 0.7
HOXC4-201ENST00000303406 MAB21L3Q8N8X9 362 aa19.43■□□□□ 0.7
HOXC4-201ENST00000303406 TXNDC5Q8NBS9 432 aaKnown RBP19.43■□□□□ 0.7
HOXC4-201ENST00000303406 FAM13CQ8NE31 585 aa19.43■□□□□ 0.7
HOXC4-201ENST00000303406 OR4K2Q8NGD2 314 aa19.43■□□□□ 0.7
HOXC4-201ENST00000303406 CFAP61Q8NHU2 1237 aa19.43■□□□□ 0.7
HOXC4-201ENST00000303406 FIBINQ8TAL6 211 aa19.43■□□□□ 0.7
HOXC4-201ENST00000303406 CCDC28BQ9BUN5 200 aa19.43■□□□□ 0.7
HOXC4-201ENST00000303406 PCDHGC4Q9Y5F7 938 aa19.43■□□□□ 0.7
HOXC4-201ENST00000303406 PRR5-ARHGAP8B1AHC4 643 aa19.42■□□□□ 0.7
HOXC4-201ENST00000303406 SLC22A2O15244 555 aa19.42■□□□□ 0.7
HOXC4-201ENST00000303406 MAGEC1O60732 1142 aa19.42■□□□□ 0.7
HOXC4-201ENST00000303406 IPO13O94829 963 aaKnown RBP19.42■□□□□ 0.7
HOXC4-201ENST00000303406 ENO1P06733 434 aaKnown RBP19.42■□□□□ 0.7
HOXC4-201ENST00000303406 PIRTP0C851 137 aa19.42■□□□□ 0.7
HOXC4-201ENST00000303406 MPSTP25325 297 aa19.42■□□□□ 0.7
HOXC4-201ENST00000303406 PMLP29590 882 aa19.42■□□□□ 0.7
HOXC4-201ENST00000303406 CA8P35219 290 aa19.42■□□□□ 0.7
HOXC4-201ENST00000303406 ARHGAP8P85298 464 aa19.42■□□□□ 0.7
HOXC4-201ENST00000303406 USP4Q13107 963 aa19.42■□□□□ 0.7
HOXC4-201ENST00000303406 LINGO4Q6UY18 593 aa19.42■□□□□ 0.7
HOXC4-201ENST00000303406 RINLQ6ZS11 566 aa19.42■□□□□ 0.7
HOXC4-201ENST00000303406 LDB1Q86U70 411 aaPredicted RBP19.42■□□□□ 0.7
HOXC4-201ENST00000303406 DDI1Q8WTU0 396 aa19.42■□□□□ 0.7
HOXC4-201ENST00000303406 LPGAT1Q92604 370 aa19.42■□□□□ 0.7
HOXC4-201ENST00000303406 FAR2Q96K12 515 aa19.42■□□□□ 0.7
HOXC4-201ENST00000303406 TRMOQ9BU70 441 aa19.42■□□□□ 0.7
HOXC4-201ENST00000303406 SYTL2Q9HCH5 934 aa19.42■□□□□ 0.7
HOXC4-201ENST00000303406 COMMD10Q9Y6G5 202 aa19.42■□□□□ 0.7
HOXC4-201ENST00000303406 A8MT66 165 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 LEFTY2O00292 366 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 BUD23O43709 281 aaKnown RBP19.41■□□□□ 0.7
HOXC4-201ENST00000303406 DIAPH2O60879 1101 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 CHRNGP07510 517 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 PTPRCAPQ14761 206 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 AARS2Q5JTZ9 985 aaKnown RBP19.41■□□□□ 0.7
HOXC4-201ENST00000303406 TMEM207Q6UWW9 146 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 TRIM67Q6ZTA4 783 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 BBS7Q8IWZ6 715 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 RHEBL1Q8TAI7 183 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 WFDC5Q8TCV5 224 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 ANKRD49Q8WVL7 239 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 RAD9AQ99638 391 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 ZBED2Q9BTP6 218 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 TMEM106CQ9BVX2 250 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 POMKQ9H5K3 350 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 EML4Q9HC35 981 aaKnown RBP19.41■□□□□ 0.7
HOXC4-201ENST00000303406 MAGEE1Q9HCI5 957 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 CRYL1Q9Y2S2 319 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 B2RBV5 119 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 SOCS5O75159 536 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 CD1DP15813 335 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 TFEBP19484 476 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 ADSLP30566 484 aaPredicted RBP19.41■□□□□ 0.7
HOXC4-201ENST00000303406 TTPAP49638 278 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 CLCN4P51793 760 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 TIAL1Q01085 375 aaKnown RBP eCLIP19.41■□□□□ 0.7
HOXC4-201ENST00000303406 UBE3AQ05086 875 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 FPGSQ05932 587 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 UBAP2LQ14157 1087 aaKnown RBP19.41■□□□□ 0.7
HOXC4-201ENST00000303406 PPM1LQ5SGD2 360 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 ARMC12Q5T9G4 340 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 PSRC1Q6PGN9 363 aaPredicted RBP19.41■□□□□ 0.7
HOXC4-201ENST00000303406 ISCA2Q86U28 154 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 RNF135Q8IUD6 432 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 SPATA6LQ8N4H0 392 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 PHOSPHO2Q8TCD6 241 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 L3HYPDHQ96EM0 354 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 TCF25Q9BQ70 676 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 TFB2MQ9H5Q4 396 aaKnown RBP19.41■□□□□ 0.7
HOXC4-201ENST00000303406 TCF7L2Q9NQB0 619 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 ABCB8Q9NUT2 735 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 FCF1Q9Y324 198 aaKnown RBP19.41■□□□□ 0.7
HOXC4-201ENST00000303406 RWDD3Q9Y3V2 267 aa19.41■□□□□ 0.7
HOXC4-201ENST00000303406 MTCL1Q9Y4B5 1905 aaKnown RBP19.4■□□□□ 0.7
HOXC4-201ENST00000303406 A0A1W2PRU2 124 aa19.4■□□□□ 0.7
HOXC4-201ENST00000303406 A8MUI8 341 aa19.4■□□□□ 0.7
HOXC4-201ENST00000303406 STX7O15400 261 aaKnown RBP19.4■□□□□ 0.7
HOXC4-201ENST00000303406 GRID2O43424 1007 aa19.4■□□□□ 0.7
HOXC4-201ENST00000303406 HTRA2O43464 458 aaPredicted RBP19.4■□□□□ 0.7
HOXC4-201ENST00000303406 NDUFS3O75489 264 aa19.4■□□□□ 0.7
HOXC4-201ENST00000303406 PGLSO95336 258 aa19.4■□□□□ 0.7
HOXC4-201ENST00000303406 CYBBP04839 570 aa19.4■□□□□ 0.7
HOXC4-201ENST00000303406 ZNF37AP17032 561 aaPredicted RBP19.4■□□□□ 0.7
HOXC4-201ENST00000303406 HOXA9P31269 272 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms