RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 FOLH1Q04609 750 aa21.98■■□□□ 1.11
TPM4-201ENST00000300933 SEMA3AQ14563 771 aa21.98■■□□□ 1.11
TPM4-201ENST00000300933 EPGNQ6UW88 154 aa21.98■■□□□ 1.11
TPM4-201ENST00000300933 RBM44Q6ZP01 1051 aaKnown RBP21.98■■□□□ 1.11
TPM4-201ENST00000300933 RYBPQ8N488 228 aaPredicted RBP21.98■■□□□ 1.11
TPM4-201ENST00000300933 DNAAF2Q9NVR5 837 aaKnown RBP21.98■■□□□ 1.11
TPM4-201ENST00000300933 DNAJC28Q9NX36 388 aa21.98■■□□□ 1.11
TPM4-201ENST00000300933 FNIP2Q9P278 1114 aa21.98■■□□□ 1.11
TPM4-201ENST00000300933 C15orf38-AP3S2A0A0A6YYH1 394 aa21.97■■□□□ 1.11
TPM4-201ENST00000300933 MROH6A6NGR9 719 aa21.97■■□□□ 1.11
TPM4-201ENST00000300933 STC2O76061 302 aa21.97■■□□□ 1.11
TPM4-201ENST00000300933 GRM2Q14416 872 aa21.97■■□□□ 1.11
TPM4-201ENST00000300933 HECTD2Q5U5R9 776 aa21.97■■□□□ 1.11
TPM4-201ENST00000300933 ARPINQ7Z6K5 226 aa21.97■■□□□ 1.11
TPM4-201ENST00000300933 PDCD6IPQ8WUM4 868 aaKnown RBP21.97■■□□□ 1.11
TPM4-201ENST00000300933 EXT2Q93063 718 aa21.97■■□□□ 1.11
TPM4-201ENST00000300933 TMEM175Q9BSA9 504 aa21.97■■□□□ 1.11
TPM4-201ENST00000300933 POMKQ9H5K3 350 aa21.97■■□□□ 1.11
TPM4-201ENST00000300933 PDFQ9HBH1 243 aa21.97■■□□□ 1.11
TPM4-201ENST00000300933 IGSF5Q9NSI5 407 aa21.97■■□□□ 1.11
TPM4-201ENST00000300933 PCDHGB4Q9UN71 923 aa21.97■■□□□ 1.11
TPM4-201ENST00000300933 PCDHGC4Q9Y5F7 938 aa21.97■■□□□ 1.11
TPM4-201ENST00000300933 PCDHGB5Q9Y5G0 923 aa21.97■■□□□ 1.11
TPM4-201ENST00000300933 HOXA2O43364 376 aa21.97■■□□□ 1.11
TPM4-201ENST00000300933 PFDN1O60925 122 aa21.97■■□□□ 1.11
TPM4-201ENST00000300933 GOT2P00505 430 aaKnown RBP21.97■■□□□ 1.11
TPM4-201ENST00000300933 GNRH1P01148 92 aa21.97■■□□□ 1.11
TPM4-201ENST00000300933 BMP1P13497 986 aa21.97■■□□□ 1.11
TPM4-201ENST00000300933 CA8P35219 290 aa21.97■■□□□ 1.11
TPM4-201ENST00000300933 KCNC1P48547 511 aa21.97■■□□□ 1.11
TPM4-201ENST00000300933 SLC11A2P49281 568 aa21.97■■□□□ 1.11
TPM4-201ENST00000300933 GPR158Q5T848 1215 aa21.97■■□□□ 1.11
TPM4-201ENST00000300933 NXNQ6DKJ4 435 aa21.97■■□□□ 1.11
TPM4-201ENST00000300933 ADGRG6Q86SQ4 1221 aa21.97■■□□□ 1.11
TPM4-201ENST00000300933 DIS3LQ8TF46 1054 aaKnown RBP21.97■■□□□ 1.11
TPM4-201ENST00000300933 SREK1Q8WXA9 508 aaKnown RBP21.97■■□□□ 1.11
TPM4-201ENST00000300933 DRC3Q9H069 523 aa21.97■■□□□ 1.11
TPM4-201ENST00000300933 TRPC7Q9HCX4 862 aa21.97■■□□□ 1.11
TPM4-201ENST00000300933 HSFX1Q9UBD0 423 aa21.97■■□□□ 1.11
TPM4-201ENST00000300933 H3BNC9 293 aa21.96■■□□□ 1.11
TPM4-201ENST00000300933 PENKP01210 267 aaPredicted RBP21.96■■□□□ 1.11
TPM4-201ENST00000300933 AOC1P19801 751 aa21.96■■□□□ 1.11
TPM4-201ENST00000300933 COPAP53621 1224 aa21.96■■□□□ 1.11
TPM4-201ENST00000300933 TBCCQ15814 346 aa21.96■■□□□ 1.11
TPM4-201ENST00000300933 UGT2A3Q6UWM9 527 aa21.96■■□□□ 1.11
TPM4-201ENST00000300933 CCDC117Q8IWD4 279 aaPredicted RBP21.96■■□□□ 1.11
TPM4-201ENST00000300933 ICA1LQ8NDH6 482 aa21.96■■□□□ 1.11
TPM4-201ENST00000300933 RMDN1Q96DB5 314 aa21.96■■□□□ 1.11
TPM4-201ENST00000300933 PPP1R2P1Q96PQ5 205 aa21.96■■□□□ 1.11
TPM4-201ENST00000300933 TTLL2Q9BWV7 592 aa21.96■■□□□ 1.11
TPM4-201ENST00000300933 CDH22Q9UJ99 828 aa21.96■■□□□ 1.11
TPM4-201ENST00000300933 SPO11Q9Y5K1 396 aa21.96■■□□□ 1.11
TPM4-201ENST00000300933 CHD7Q9P2D1 2997 aa21.96■■□□□ 1.11
TPM4-201ENST00000300933 CCDC162PA2VCL2 907 aa21.96■■□□□ 1.11
TPM4-201ENST00000300933 SNAP91O60641 907 aa21.96■■□□□ 1.11
TPM4-201ENST00000300933 S1PR4O95977 384 aa21.96■■□□□ 1.11
TPM4-201ENST00000300933 ATP6V1B1P15313 513 aa21.96■■□□□ 1.11
TPM4-201ENST00000300933 RPL14P50914 215 aaKnown RBP21.96■■□□□ 1.11
TPM4-201ENST00000300933 YBEYP58557 167 aaPredicted RBP21.96■■□□□ 1.11
TPM4-201ENST00000300933 REM2Q8IYK8 340 aaPredicted RBP21.96■■□□□ 1.11
TPM4-201ENST00000300933 DEFB107AQ8IZN7 70 aa21.96■■□□□ 1.11
TPM4-201ENST00000300933 ZBED2Q9BTP6 218 aa21.96■■□□□ 1.11
TPM4-201ENST00000300933 MRPL46Q9H2W6 279 aaKnown RBP21.96■■□□□ 1.11
TPM4-201ENST00000300933 TNFRSF12AQ9NP84 129 aa21.96■■□□□ 1.11
TPM4-201ENST00000300933 AGO1Q9UL18 857 aaKnown RBP21.96■■□□□ 1.11
TPM4-201ENST00000300933 ATP11BQ9Y2G3 1177 aa21.96■■□□□ 1.11
TPM4-201ENST00000300933 ANKRD12Q6UB98 2062 aa21.96■■□□□ 1.11
TPM4-201ENST00000300933 GRID2O43424 1007 aa21.95■■□□□ 1.1
TPM4-201ENST00000300933 LEPRP48357 1165 aaKnown RBP21.95■■□□□ 1.1
TPM4-201ENST00000300933 MAPKAPK2P49137 400 aa21.95■■□□□ 1.1
TPM4-201ENST00000300933 TUFMP49411 452 aaKnown RBP21.95■■□□□ 1.1
TPM4-201ENST00000300933 APLP1P51693 650 aa21.95■■□□□ 1.1
TPM4-201ENST00000300933 POU4F1Q01851 419 aa21.95■■□□□ 1.1
TPM4-201ENST00000300933 FSCBQ5H9T9 825 aa21.95■■□□□ 1.1
TPM4-201ENST00000300933 PPM1LQ5SGD2 360 aa21.95■■□□□ 1.1
TPM4-201ENST00000300933 FRMD7Q6ZUT3 714 aa21.95■■□□□ 1.1
TPM4-201ENST00000300933 TCF7L2Q9NQB0 619 aa21.95■■□□□ 1.1
TPM4-201ENST00000300933 VWA7Q9Y334 891 aa21.95■■□□□ 1.1
TPM4-201ENST00000300933 SMIM31A0A1B0GVY4 71 aa21.95■■□□□ 1.1
TPM4-201ENST00000300933 MATN2O00339 956 aa21.95■■□□□ 1.1
TPM4-201ENST00000300933 SERPINF2P08697 491 aa21.95■■□□□ 1.1
TPM4-201ENST00000300933 ALOX15P16050 662 aaPredicted RBP21.95■■□□□ 1.1
TPM4-201ENST00000300933 TRIM67Q6ZTA4 783 aa21.95■■□□□ 1.1
TPM4-201ENST00000300933 KLHL23Q8NBE8 558 aa21.95■■□□□ 1.1
TPM4-201ENST00000300933 ZNF461Q8TAF7 563 aa21.95■■□□□ 1.1
TPM4-201ENST00000300933 DGCR14Q96DF8 476 aaKnown RBP21.95■■□□□ 1.1
TPM4-201ENST00000300933 VWCEQ96DN2 955 aa21.95■■□□□ 1.1
TPM4-201ENST00000300933 ALG9Q9H6U8 611 aa21.95■■□□□ 1.1
TPM4-201ENST00000300933 POMPQ9Y244 141 aa21.95■■□□□ 1.1
TPM4-201ENST00000300933 SH3BP1Q9Y3L3 701 aa21.95■■□□□ 1.1
TPM4-201ENST00000300933 MYOCOSA0A1B0GUC4 107 aa21.94■■□□□ 1.1
TPM4-201ENST00000300933 TMEM114B3SHH9 223 aa21.94■■□□□ 1.1
TPM4-201ENST00000300933 VILLO15195 856 aa21.94■■□□□ 1.1
TPM4-201ENST00000300933 CCL5P13501 91 aa21.94■■□□□ 1.1
TPM4-201ENST00000300933 DEFB103AP81534 67 aa21.94■■□□□ 1.1
TPM4-201ENST00000300933 TLR1Q15399 786 aa21.94■■□□□ 1.1
TPM4-201ENST00000300933 LSM12Q3MHD2 195 aaKnown RBP21.94■■□□□ 1.1
TPM4-201ENST00000300933 SLC39A5Q6ZMH5 540 aa21.94■■□□□ 1.1
TPM4-201ENST00000300933 TADA1Q96BN2 335 aa21.94■■□□□ 1.1
TPM4-201ENST00000300933 PAK6Q9NQU5 681 aaPredicted RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms