RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 TIMM22Q9Y584 194 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 LOC285556D6RIA3 1793 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 GIPC1O14908 333 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 ZBTB11O95625 1053 aaPredicted RBP13.48□□□□□ -0.25
CTDP1-202ENST00000299543 GPR15P49685 360 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 CARTPTQ16568 116 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 UPP1Q16831 310 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 IFNEQ86WN2 208 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 SNX29P2Q8IUI4 249 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 DDIASQ8IXT1 998 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 THEM5Q8N1Q8 247 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 SH3RF2Q8TEC5 729 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 LPGAT1Q92604 370 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 TRIM8Q9BZR9 551 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 RSL24D1Q9UHA3 163 aaKnown RBP13.48□□□□□ -0.25
CTDP1-202ENST00000299543 PRG3Q9Y2Y8 225 aaPredicted RBP13.48□□□□□ -0.25
CTDP1-202ENST00000299543 LRRC14BA6NHZ5 514 aa13.47□□□□□ -0.25
CTDP1-202ENST00000299543 PPP6CO00743 305 aa13.47□□□□□ -0.25
CTDP1-202ENST00000299543 CNTN5O94779 1100 aa13.47□□□□□ -0.25
CTDP1-202ENST00000299543 IPO13O94829 963 aaKnown RBP13.47□□□□□ -0.25
CTDP1-202ENST00000299543 CELF2O95319 508 aaKnown RBP13.47□□□□□ -0.25
CTDP1-202ENST00000299543 SIX3O95343 332 aaPredicted RBP13.47□□□□□ -0.25
CTDP1-202ENST00000299543 CASP2P42575 452 aa13.47□□□□□ -0.25
CTDP1-202ENST00000299543 KPNA2P52292 529 aaKnown RBP13.47□□□□□ -0.25
CTDP1-202ENST00000299543 GDF6Q6KF10 455 aaPredicted RBP13.47□□□□□ -0.25
CTDP1-202ENST00000299543 CENPSQ8N2Z9 138 aa13.47□□□□□ -0.25
CTDP1-202ENST00000299543 SPPL2BQ8TCT7 592 aa13.47□□□□□ -0.25
CTDP1-202ENST00000299543 CNDP1Q96KN2 507 aa13.47□□□□□ -0.25
CTDP1-202ENST00000299543 GPATCH1Q9BRR8 931 aaKnown RBP13.47□□□□□ -0.25
CTDP1-202ENST00000299543 KATNAL1Q9BW62 490 aa13.47□□□□□ -0.25
CTDP1-202ENST00000299543 CDC14AQ9UNH5 594 aa13.47□□□□□ -0.25
CTDP1-202ENST00000299543 HS3ST4Q9Y661 456 aa13.47□□□□□ -0.25
CTDP1-202ENST00000299543 BRCA1P38398 1863 aaKnown RBP13.47□□□□□ -0.25
CTDP1-202ENST00000299543 TARM1B6A8C7 271 aa13.47□□□□□ -0.25
CTDP1-202ENST00000299543 LTA4HP09960 611 aaKnown RBP13.47□□□□□ -0.25
CTDP1-202ENST00000299543 HAPLN1P10915 354 aaPredicted RBP13.47□□□□□ -0.25
CTDP1-202ENST00000299543 TCEA1P23193 301 aaKnown RBP13.47□□□□□ -0.25
CTDP1-202ENST00000299543 SERPINH1P50454 418 aaKnown RBP13.47□□□□□ -0.25
CTDP1-202ENST00000299543 BCAP31P51572 246 aa13.47□□□□□ -0.25
CTDP1-202ENST00000299543 ARSDP51689 593 aa13.47□□□□□ -0.25
CTDP1-202ENST00000299543 RPS6KA2Q15349 733 aa13.47□□□□□ -0.25
CTDP1-202ENST00000299543 HECTD2Q5U5R9 776 aa13.47□□□□□ -0.25
CTDP1-202ENST00000299543 MARC1Q5VT66 337 aa13.47□□□□□ -0.25
CTDP1-202ENST00000299543 NANOGP8Q6NSW7 305 aa13.47□□□□□ -0.25
CTDP1-202ENST00000299543 MYO1HQ8N1T3 1032 aa13.47□□□□□ -0.25
CTDP1-202ENST00000299543 HMCESQ96FZ2 354 aa13.47□□□□□ -0.25
CTDP1-202ENST00000299543 CIB1Q99828 191 aa13.47□□□□□ -0.25
CTDP1-202ENST00000299543 ADAM2Q99965 735 aa13.47□□□□□ -0.25
CTDP1-202ENST00000299543 ABCC13Q9NSE7 274 aa13.47□□□□□ -0.25
CTDP1-202ENST00000299543 THEGQ9P2T0 379 aa13.47□□□□□ -0.25
CTDP1-202ENST00000299543 VWA7Q9Y334 891 aa13.47□□□□□ -0.25
CTDP1-202ENST00000299543 TMED5Q9Y3A6 229 aa13.47□□□□□ -0.25
CTDP1-202ENST00000299543 AP4S1Q9Y587 144 aa13.47□□□□□ -0.25
CTDP1-202ENST00000299543 TRPV2Q9Y5S1 764 aa13.47□□□□□ -0.25
CTDP1-202ENST00000299543 UBA6A0AVT1 1052 aaPredicted RBP13.46□□□□□ -0.25
CTDP1-202ENST00000299543 MRASO14807 208 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 TADA2AO75478 443 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 SOAT2O75908 522 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 CHRNA1P02708 482 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 KCNC1P48547 511 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 NDST2P52849 883 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 POU4F1Q01851 419 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 NSUN2Q08J23 767 aaKnown RBP eCLIP13.46□□□□□ -0.25
CTDP1-202ENST00000299543 STX5Q13190 355 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 TAF1CQ15572 869 aaPredicted RBP13.46□□□□□ -0.25
CTDP1-202ENST00000299543 LZTR1Q8N653 840 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 C2CD4AQ8NCU7 369 aaPredicted RBP13.46□□□□□ -0.25
CTDP1-202ENST00000299543 DDHD1Q8NEL9 900 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 PSMG2Q969U7 264 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 B3GALT6Q96L58 329 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 TBATAQ96M53 351 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 EML4Q9HC35 981 aaKnown RBP13.46□□□□□ -0.25
CTDP1-202ENST00000299543 UXTQ9UBK9 157 aaPredicted RBP13.46□□□□□ -0.25
CTDP1-202ENST00000299543 PADI3Q9ULW8 664 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 NOD1Q9Y239 953 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 TRAF6Q9Y4K3 522 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 ZNF839A8K0R7 811 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 NR5A2O00482 541 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 TRIM38O00635 465 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 CASQ2O14958 399 aaPredicted RBP13.46□□□□□ -0.25
CTDP1-202ENST00000299543 AKAP10O43572 662 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 GRK4P32298 578 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 TUFMP49411 452 aaKnown RBP13.46□□□□□ -0.25
CTDP1-202ENST00000299543 PRKAA2P54646 552 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 STX1BP61266 288 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 PURAQ00577 322 aaKnown RBP13.46□□□□□ -0.25
CTDP1-202ENST00000299543 PSMD5Q16401 504 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 PDCD4Q53EL6 469 aaKnown RBP13.46□□□□□ -0.25
CTDP1-202ENST00000299543 MTX3Q5HYI7 312 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 HABP4Q5JVS0 413 aaKnown RBP13.46□□□□□ -0.25
CTDP1-202ENST00000299543 TAF2Q6P1X5 1199 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 COX4I2Q96KJ9 171 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 BTBD9Q96Q07 612 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 IL12RB2Q99665 862 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 ACBD6Q9BR61 282 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 MRPS26Q9BYN8 205 aaKnown RBP13.46□□□□□ -0.25
CTDP1-202ENST00000299543 NOL11Q9H8H0 719 aaKnown RBP13.46□□□□□ -0.25
CTDP1-202ENST00000299543 COQ10BQ9H8M1 238 aa13.46□□□□□ -0.25
CTDP1-202ENST00000299543 MARCH4Q9P2E8 410 aaPredicted RBP13.46□□□□□ -0.25
CTDP1-202ENST00000299543 EGFL7Q9UHF1 273 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms