RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 GPX3P22352 226 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 RPL5P46777 297 aaKnown RBP13.64□□□□□ -0.23
BCCIP-202ENST00000299130 RHDQ02161 417 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 GALNT3Q14435 633 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 RBBP5Q15291 538 aaKnown RBP13.64□□□□□ -0.23
BCCIP-202ENST00000299130 MYLK3Q32MK0 819 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 MTX3Q5HYI7 312 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 CST9Q5W186 159 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 MON1AQ86VX9 555 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 SLC22A9Q8IVM8 553 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 HERC6Q8IVU3 1022 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 TEX26Q8N6G2 289 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 BLOC1S5Q8TDH9 187 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 TADA1Q96BN2 335 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 L3HYPDHQ96EM0 354 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 C19orf60Q96EN9 201 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 KCNA7Q96RP8 456 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 AKTIPQ9H8T0 292 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 IL1RL2Q9HB29 575 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 SPAG4Q9NPE6 437 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 TMEM181Q9P2C4 612 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 SCML2Q9UQR0 700 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 DNAJC15Q9Y5T4 150 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 COMMD3-BMI1R4GMX3 469 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 SMIM31A0A1B0GVY4 71 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 LOC285095A0A1B0GVY8 99 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 TNPO2O14787 897 aaKnown RBP13.63□□□□□ -0.23
BCCIP-202ENST00000299130 TYMPP19971 482 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 SLC7A2P52569 658 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 GALNT1Q10472 559 aaPredicted RBP13.63□□□□□ -0.23
BCCIP-202ENST00000299130 GRB7Q14451 532 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 ARMC3Q5W041 872 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 AP1ARQ63HQ0 302 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 AHI1Q8N157 1196 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 NUP93Q8N1F7 819 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 AFAP1L2Q8N4X5 818 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 PTGR2Q8N8N7 351 aaPredicted RBP13.63□□□□□ -0.23
BCCIP-202ENST00000299130 SEMA3CQ99985 751 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 ZNF696Q9H7X3 374 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 EPS15L1Q9UBC2 864 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 CROTQ9UKG9 612 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 PCDHB8Q9UN66 801 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 SNX13Q9Y5W8 968 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 TCRBV3S1A0A5B6 114 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 CCDC162PA2VCL2 907 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 ZNF839A8K0R7 811 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 CDK14O94921 469 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 FAM58BPP0C7Q3 252 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 SLC2A3P11169 496 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 MTHFD2P13995 350 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 FDXRP22570 491 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 HERVK_113P63132 956 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 MAPRE2Q15555 327 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 MSANTD2Q6P1R3 559 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 ZNF598Q86UK7 904 aaKnown RBP13.63□□□□□ -0.23
BCCIP-202ENST00000299130 ATAD1Q8NBU5 361 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 GRIN3AQ8TCU5 1115 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 DGCR14Q96DF8 476 aaKnown RBP13.63□□□□□ -0.23
BCCIP-202ENST00000299130 CIB1Q99828 191 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 SLC25A23Q9BV35 468 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 ERVK-6Q9BXR3 956 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 TRIM8Q9BZR9 551 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 EPB41L1Q9H4G0 881 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 OCEL1Q9H607 264 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 MAP10Q9P2G4 905 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 IKZF3Q9UKT9 509 aa13.63□□□□□ -0.23
BCCIP-202ENST00000299130 PLOD2O00469 737 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 TIPRLO75663 272 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 SRP72O76094 671 aaKnown RBP13.62□□□□□ -0.23
BCCIP-202ENST00000299130 TNFAIP8O95379 198 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 CYBAP13498 195 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 ATP6V1B2P21281 511 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 IKBKEQ14164 716 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.62□□□□□ -0.23
BCCIP-202ENST00000299130 KLHDC10Q6PID8 442 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 GALNT7Q86SF2 657 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 RTN4RL1Q86UN2 441 aaPredicted RBP13.62□□□□□ -0.23
BCCIP-202ENST00000299130 CHERPQ8IWX8 916 aaKnown RBP13.62□□□□□ -0.23
BCCIP-202ENST00000299130 MYO1HQ8N1T3 1032 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 ZFP28Q8NHY6 868 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 B3GALT6Q96L58 329 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 NSMCE3Q96MG7 304 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 RBM38Q9H0Z9 239 aaKnown RBP13.62□□□□□ -0.23
BCCIP-202ENST00000299130 TUBB1Q9H4B7 451 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 NOL11Q9H8H0 719 aaKnown RBP13.62□□□□□ -0.23
BCCIP-202ENST00000299130 MID1IP1Q9NPA3 183 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 TRMT13Q9NUP7 481 aaKnown RBP13.62□□□□□ -0.23
BCCIP-202ENST00000299130 CNOT6Q9ULM6 557 aaKnown RBP13.62□□□□□ -0.23
BCCIP-202ENST00000299130 PRG3Q9Y2Y8 225 aaPredicted RBP13.62□□□□□ -0.23
BCCIP-202ENST00000299130 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.62□□□□□ -0.23
BCCIP-202ENST00000299130 BRCA2P51587 3418 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 IGLV3-10A0A075B6K4 115 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 NR5A2O00482 541 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 PIP5K1BO14986 540 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 CD3EAPO15446 510 aaKnown RBP13.62□□□□□ -0.23
BCCIP-202ENST00000299130 KPNA6O60684 536 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 RTN3O95197 1032 aaPredicted RBP13.62□□□□□ -0.23
BCCIP-202ENST00000299130 ASGR1P07306 291 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 CHRM3P20309 590 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 ECT2LQ008S8 904 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms