RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 RPL22P35268 128 aaKnown RBP21.2■□□□□ 0.98
SMCO4-201ENST00000298966 GDF10P55107 478 aa21.2■□□□□ 0.98
SMCO4-201ENST00000298966 DAB2P98082 770 aa21.2■□□□□ 0.98
SMCO4-201ENST00000298966 AP1B1Q10567 949 aa21.2■□□□□ 0.98
SMCO4-201ENST00000298966 ARHGAP40Q5TG30 622 aa21.2■□□□□ 0.98
SMCO4-201ENST00000298966 IZUMO3Q5VZ72 239 aa21.2■□□□□ 0.98
SMCO4-201ENST00000298966 TBC1D3GQ6DHY5 549 aa21.2■□□□□ 0.98
SMCO4-201ENST00000298966 TBC1D3CQ6IPX1 549 aa21.2■□□□□ 0.98
SMCO4-201ENST00000298966 ARHGAP12Q8IWW6 846 aa21.2■□□□□ 0.98
SMCO4-201ENST00000298966 TBC1D3Q8IZP1 549 aaPredicted RBP21.2■□□□□ 0.98
SMCO4-201ENST00000298966 AADATQ8N5Z0 425 aa21.2■□□□□ 0.98
SMCO4-201ENST00000298966 LMLNQ96KR4 655 aa21.2■□□□□ 0.98
SMCO4-201ENST00000298966 SPATA13Q96N96 652 aa21.2■□□□□ 0.98
SMCO4-201ENST00000298966 MAGEH1Q9H213 219 aa21.2■□□□□ 0.98
SMCO4-201ENST00000298966 MPP6Q9NZW5 540 aa21.2■□□□□ 0.98
SMCO4-201ENST00000298966 ZNF212Q9UDV6 495 aa21.2■□□□□ 0.98
SMCO4-201ENST00000298966 INTS6Q9UL03 887 aaKnown RBP21.2■□□□□ 0.98
SMCO4-201ENST00000298966 ERVW-1Q9UQF0 538 aa21.2■□□□□ 0.98
SMCO4-201ENST00000298966 MFHAS1Q9Y4C4 1052 aa21.2■□□□□ 0.98
SMCO4-201ENST00000298966 TTC34A8MYJ7 566 aa21.19■□□□□ 0.98
SMCO4-201ENST00000298966 RAMP2O60895 175 aa21.19■□□□□ 0.98
SMCO4-201ENST00000298966 FAM153BP0C7A2 387 aa21.19■□□□□ 0.98
SMCO4-201ENST00000298966 FDFT1P37268 417 aa21.19■□□□□ 0.98
SMCO4-201ENST00000298966 HSPA9P38646 679 aaKnown RBP21.19■□□□□ 0.98
SMCO4-201ENST00000298966 PLTPP55058 493 aa21.19■□□□□ 0.98
SMCO4-201ENST00000298966 OXCT1P55809 520 aa21.19■□□□□ 0.98
SMCO4-201ENST00000298966 SLMAPQ14BN4 828 aa21.19■□□□□ 0.98
SMCO4-201ENST00000298966 FAM153CQ494X1 144 aa21.19■□□□□ 0.98
SMCO4-201ENST00000298966 RNF219Q5W0B1 726 aaPredicted RBP21.19■□□□□ 0.98
SMCO4-201ENST00000298966 ITPRIPL1Q6GPH6 555 aa21.19■□□□□ 0.98
SMCO4-201ENST00000298966 HIBCHQ6NVY1 386 aaPredicted RBP21.19■□□□□ 0.98
SMCO4-201ENST00000298966 PPP1R21Q6ZMI0 780 aa21.19■□□□□ 0.98
SMCO4-201ENST00000298966 IQCHQ86VS3 1027 aa21.19■□□□□ 0.98
SMCO4-201ENST00000298966 PPIL6Q8IXY8 311 aa21.19■□□□□ 0.98
SMCO4-201ENST00000298966 LSMEM2Q8N112 164 aa21.19■□□□□ 0.98
SMCO4-201ENST00000298966 CARNMT1Q8N4J0 409 aa21.19■□□□□ 0.98
SMCO4-201ENST00000298966 FAM129BQ96TA1 746 aa21.19■□□□□ 0.98
SMCO4-201ENST00000298966 CPNE5Q9HCH3 593 aa21.19■□□□□ 0.98
SMCO4-201ENST00000298966 HAUS2Q9NVX0 235 aa21.19■□□□□ 0.98
SMCO4-201ENST00000298966 FAM153AQ9UHL3 310 aa21.19■□□□□ 0.98
SMCO4-201ENST00000298966 LATO43561 262 aa21.18■□□□□ 0.98
SMCO4-201ENST00000298966 SIGLEC6O43699 453 aa21.18■□□□□ 0.98
SMCO4-201ENST00000298966 SDC3O75056 442 aa21.18■□□□□ 0.98
SMCO4-201ENST00000298966 OR1E1P30953 314 aa21.18■□□□□ 0.98
SMCO4-201ENST00000298966 NUDT1P36639 197 aa21.18■□□□□ 0.98
SMCO4-201ENST00000298966 MAGEA6P43360 314 aa21.18■□□□□ 0.98
SMCO4-201ENST00000298966 ITGA8P53708 1063 aa21.18■□□□□ 0.98
SMCO4-201ENST00000298966 PPP2CBP62714 309 aa21.18■□□□□ 0.98
SMCO4-201ENST00000298966 PPP2CAP67775 309 aa21.18■□□□□ 0.98
SMCO4-201ENST00000298966 OVGP1Q12889 678 aa21.18■□□□□ 0.98
SMCO4-201ENST00000298966 CDH18Q13634 790 aa21.18■□□□□ 0.98
SMCO4-201ENST00000298966 TRIP13Q15645 432 aaPredicted RBP21.18■□□□□ 0.98
SMCO4-201ENST00000298966 ALFQ53S48 1182 aa21.18■□□□□ 0.98
SMCO4-201ENST00000298966 PITRM1Q5JRX3 1037 aa21.18■□□□□ 0.98
SMCO4-201ENST00000298966 TMCO4Q5TGY1 634 aa21.18■□□□□ 0.98
SMCO4-201ENST00000298966 ARHGEF18Q6ZSZ5 1173 aa21.18■□□□□ 0.98
SMCO4-201ENST00000298966 STK40Q8N2I9 435 aa21.18■□□□□ 0.98
SMCO4-201ENST00000298966 FAM181AQ8N9Y4 354 aa21.18■□□□□ 0.98
SMCO4-201ENST00000298966 FBXO25Q8TCJ0 367 aa21.18■□□□□ 0.98
SMCO4-201ENST00000298966 PKNOX2Q96KN3 472 aa21.18■□□□□ 0.98
SMCO4-201ENST00000298966 SLC39A8Q9C0K1 460 aa21.18■□□□□ 0.98
SMCO4-201ENST00000298966 ACBD3Q9H3P7 528 aa21.18■□□□□ 0.98
SMCO4-201ENST00000298966 DMTF1Q9Y222 760 aa21.18■□□□□ 0.98
SMCO4-201ENST00000298966 PCDHB1Q9Y5F3 818 aa21.18■□□□□ 0.98
SMCO4-201ENST00000298966 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.17■□□□□ 0.98
SMCO4-201ENST00000298966 ILVBLA1L0T0 632 aa21.17■□□□□ 0.98
SMCO4-201ENST00000298966 B8ZZF3 427 aa21.17■□□□□ 0.98
SMCO4-201ENST00000298966 SASH3O75995 380 aa21.17■□□□□ 0.98
SMCO4-201ENST00000298966 MAP3K6O95382 1288 aa21.17■□□□□ 0.98
SMCO4-201ENST00000298966 IL1BP01584 269 aa21.17■□□□□ 0.98
SMCO4-201ENST00000298966 VAV1P15498 845 aa21.17■□□□□ 0.98
SMCO4-201ENST00000298966 VPS41P49754 854 aa21.17■□□□□ 0.98
SMCO4-201ENST00000298966 IFI35P80217 286 aaPredicted RBP21.17■□□□□ 0.98
SMCO4-201ENST00000298966 CDK16Q00536 496 aa21.17■□□□□ 0.98
SMCO4-201ENST00000298966 ZNF177Q13360 481 aaPredicted RBP21.17■□□□□ 0.98
SMCO4-201ENST00000298966 STAT4Q14765 748 aa21.17■□□□□ 0.98
SMCO4-201ENST00000298966 POLD3Q15054 466 aaPredicted RBP21.17■□□□□ 0.98
SMCO4-201ENST00000298966 RNASEH2BQ5TBB1 312 aaKnown RBP21.17■□□□□ 0.98
SMCO4-201ENST00000298966 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.17■□□□□ 0.98
SMCO4-201ENST00000298966 NSMCE1Q8WV22 266 aa21.17■□□□□ 0.98
SMCO4-201ENST00000298966 KCNE4Q8WWG9 221 aa21.17■□□□□ 0.98
SMCO4-201ENST00000298966 HIC2Q96JB3 615 aa21.17■□□□□ 0.98
SMCO4-201ENST00000298966 PRICKLE1Q96MT3 831 aaPredicted RBP21.17■□□□□ 0.98
SMCO4-201ENST00000298966 TBC1D30Q9Y2I9 924 aa21.17■□□□□ 0.98
SMCO4-201ENST00000298966 FARP1Q9Y4F1 1045 aaPredicted RBP21.17■□□□□ 0.98
SMCO4-201ENST00000298966 DOCK9Q9BZ29 2069 aa21.17■□□□□ 0.98
SMCO4-201ENST00000298966 RASA4BC9J798 803 aa21.16■□□□□ 0.98
SMCO4-201ENST00000298966 RNF103O00237 685 aa21.16■□□□□ 0.98
SMCO4-201ENST00000298966 DFFAO00273 331 aa21.16■□□□□ 0.98
SMCO4-201ENST00000298966 TRIM38O00635 465 aa21.16■□□□□ 0.98
SMCO4-201ENST00000298966 MATN3O15232 486 aa21.16■□□□□ 0.98
SMCO4-201ENST00000298966 TP73O15350 636 aa21.16■□□□□ 0.98
SMCO4-201ENST00000298966 RASA4O43374 803 aa21.16■□□□□ 0.98
SMCO4-201ENST00000298966 CNTN5O94779 1100 aa21.16■□□□□ 0.98
SMCO4-201ENST00000298966 MPOP05164 745 aa21.16■□□□□ 0.98
SMCO4-201ENST00000298966 ZSCAN5DPP0CG00 497 aa21.16■□□□□ 0.98
SMCO4-201ENST00000298966 C6P13671 934 aa21.16■□□□□ 0.98
SMCO4-201ENST00000298966 MZF1P28698 734 aaPredicted RBP21.16■□□□□ 0.98
SMCO4-201ENST00000298966 CTSOP43234 321 aaPredicted RBP21.16■□□□□ 0.98
SMCO4-201ENST00000298966 RPS24P62847 133 aaKnown RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms