RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 TYRP14679 529 aa25.66■■□□□ 1.7
SDCCAG3-201ENST00000298537 PFKLP17858 780 aa25.66■■□□□ 1.7
SDCCAG3-201ENST00000298537 CRABP2P29373 138 aa25.66■■□□□ 1.7
SDCCAG3-201ENST00000298537 EPHB1P54762 984 aa25.66■■□□□ 1.7
SDCCAG3-201ENST00000298537 AQP5P55064 265 aa25.66■■□□□ 1.7
SDCCAG3-201ENST00000298537 LYSMD3Q7Z3D4 306 aa25.66■■□□□ 1.7
SDCCAG3-201ENST00000298537 MYO19Q96H55 970 aa25.66■■□□□ 1.7
SDCCAG3-201ENST00000298537 ECT2Q9H8V3 914 aa25.66■■□□□ 1.7
SDCCAG3-201ENST00000298537 GPAMQ9HCL2 828 aa25.66■■□□□ 1.7
SDCCAG3-201ENST00000298537 EYSQ5T1H1 3165 aa25.66■■□□□ 1.7
SDCCAG3-201ENST00000298537 C2orf81A6NN90 581 aa25.65■■□□□ 1.7
SDCCAG3-201ENST00000298537 PGLSO95336 258 aa25.65■■□□□ 1.7
SDCCAG3-201ENST00000298537 CCDC166P0CW27 439 aa25.65■■□□□ 1.7
SDCCAG3-201ENST00000298537 LPOP22079 712 aaPredicted RBP25.65■■□□□ 1.7
SDCCAG3-201ENST00000298537 STC1P52823 247 aa25.65■■□□□ 1.7
SDCCAG3-201ENST00000298537 TMEM215Q68D42 235 aa25.65■■□□□ 1.7
SDCCAG3-201ENST00000298537 TRIM68Q6AZZ1 485 aa25.65■■□□□ 1.7
SDCCAG3-201ENST00000298537 VN1R2Q8NFZ6 395 aa25.65■■□□□ 1.7
SDCCAG3-201ENST00000298537 AGR3Q8TD06 166 aa25.65■■□□□ 1.7
SDCCAG3-201ENST00000298537 PEX13Q92968 403 aa25.65■■□□□ 1.7
SDCCAG3-201ENST00000298537 APOL5Q9BWW9 433 aa25.65■■□□□ 1.7
SDCCAG3-201ENST00000298537 GATA5Q9BWX5 397 aaPredicted RBP25.65■■□□□ 1.7
SDCCAG3-201ENST00000298537 SPHK2Q9NRA0 654 aa25.65■■□□□ 1.7
SDCCAG3-201ENST00000298537 MRPS23Q9Y3D9 190 aaKnown RBP25.65■■□□□ 1.7
SDCCAG3-201ENST00000298537 HNRNPA1P09651 372 aaKnown RBP eCLIP25.65■■□□□ 1.7
SDCCAG3-201ENST00000298537 DDX6P26196 483 aaKnown RBP eCLIP25.65■■□□□ 1.71e-6■■□□□ 12.2
SDCCAG3-201ENST00000298537 WEE1P30291 646 aa25.65■■□□□ 1.7
SDCCAG3-201ENST00000298537 PEX6Q13608 980 aa25.65■■□□□ 1.7
SDCCAG3-201ENST00000298537 MAVSQ7Z434 540 aa25.65■■□□□ 1.7
SDCCAG3-201ENST00000298537 ADGRG2Q8IZP9 1017 aa25.65■■□□□ 1.7
SDCCAG3-201ENST00000298537 GPR150Q8NGU9 434 aa25.65■■□□□ 1.7
SDCCAG3-201ENST00000298537 SORCS1Q8WY21 1168 aa25.65■■□□□ 1.7
SDCCAG3-201ENST00000298537 CCDC97Q96F63 343 aaPredicted RBP25.65■■□□□ 1.7
SDCCAG3-201ENST00000298537 OXSMQ9NWU1 459 aa25.65■■□□□ 1.7
SDCCAG3-201ENST00000298537 DLX3O60479 287 aa25.64■■□□□ 1.7
SDCCAG3-201ENST00000298537 CBX6O95503 412 aa25.64■■□□□ 1.7
SDCCAG3-201ENST00000298537 TARSP26639 723 aaKnown RBP25.64■■□□□ 1.7
SDCCAG3-201ENST00000298537 CA5AP35218 305 aa25.64■■□□□ 1.7
SDCCAG3-201ENST00000298537 MAGEA10P43363 369 aaPredicted RBP25.64■■□□□ 1.7
SDCCAG3-201ENST00000298537 NRIP1P48552 1158 aa25.64■■□□□ 1.7
SDCCAG3-201ENST00000298537 ABCE1P61221 599 aaKnown RBP25.64■■□□□ 1.7
SDCCAG3-201ENST00000298537 ARMC12Q5T9G4 340 aa25.64■■□□□ 1.7
SDCCAG3-201ENST00000298537 MRNIPQ6NTE8 343 aa25.64■■□□□ 1.7
SDCCAG3-201ENST00000298537 ZYG11AQ6WRX3 759 aa25.64■■□□□ 1.7
SDCCAG3-201ENST00000298537 KIF2BQ8N4N8 673 aa25.64■■□□□ 1.7
SDCCAG3-201ENST00000298537 RIMKLBQ9ULI2 386 aa25.64■■□□□ 1.7
SDCCAG3-201ENST00000298537 OR1I1O60431 355 aa25.64■■□□□ 1.69
SDCCAG3-201ENST00000298537 CHRNGP07510 517 aa25.64■■□□□ 1.69
SDCCAG3-201ENST00000298537 MC4RP32245 332 aa25.64■■□□□ 1.69
SDCCAG3-201ENST00000298537 VIPR2P41587 438 aa25.64■■□□□ 1.69
SDCCAG3-201ENST00000298537 POLD2P49005 469 aa25.64■■□□□ 1.69
SDCCAG3-201ENST00000298537 PLK1P53350 603 aa25.64■■□□□ 1.69
SDCCAG3-201ENST00000298537 AP1S1P61966 158 aa25.64■■□□□ 1.69
SDCCAG3-201ENST00000298537 ZNF398Q8TD17 642 aa25.64■■□□□ 1.69
SDCCAG3-201ENST00000298537 GDPD5Q8WTR4 605 aa25.64■■□□□ 1.69
SDCCAG3-201ENST00000298537 ACTR5Q9H9F9 607 aaPredicted RBP25.64■■□□□ 1.69
SDCCAG3-201ENST00000298537 ZNF711Q9Y462 761 aa25.64■■□□□ 1.69
SDCCAG3-201ENST00000298537 ATG2AQ2TAZ0 1938 aa25.64■■□□□ 1.69
SDCCAG3-201ENST00000298537 UBA6A0AVT1 1052 aaPredicted RBP25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 EPOPA6NHQ4 379 aa25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 GOLGA8CPA6NN73 597 aa25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 FGF19O95750 216 aa25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 KCNA5P22460 613 aa25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 PMLP29590 882 aa25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 USP4Q13107 963 aa25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 LAMB3Q13751 1172 aa25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 DBN1Q16643 649 aa25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 TCEAL5Q5H9L2 206 aa25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 FAM219BQ5XKK7 198 aa25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 GALNT7Q86SF2 657 aa25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 TBC1D1Q86TI0 1168 aaPredicted RBP25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 SMG7Q92540 1137 aaKnown RBP25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 TSNARE1Q96NA8 513 aa25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 SHCBP1LQ9BZQ2 653 aa25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 PIDD1Q9HB75 910 aa25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 TRIM13O60858 407 aa25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 WISP3O95389 354 aaPredicted RBP25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 T-ENOLP0DO92 83 aa25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 KCNC1P48547 511 aa25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 ERVK-21P61565 698 aa25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 BCL2L1Q07817 233 aa25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 CCDC15Q0P6D6 951 aa25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 SETDB1Q15047 1291 aa25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 ACCSLQ4AC99 568 aa25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 VWA5B1Q5TIE3 1220 aa25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 ZNF781Q8N8C0 355 aa25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 SKA1Q96BD8 255 aa25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 GALPQ9UBC7 116 aa25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 ZFP69BQ9UJL9 534 aa25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 MED16Q9Y2X0 877 aa25.63■■□□□ 1.69
SDCCAG3-201ENST00000298537 MYO9BQ13459 2157 aa25.62■■□□□ 1.69
SDCCAG3-201ENST00000298537 STX7O15400 261 aaKnown RBP25.62■■□□□ 1.69
SDCCAG3-201ENST00000298537 DCTN3O75935 186 aa25.62■■□□□ 1.69
SDCCAG3-201ENST00000298537 COL6A2P12110 1019 aa25.62■■□□□ 1.69
SDCCAG3-201ENST00000298537 FMO4P31512 558 aa25.62■■□□□ 1.69
SDCCAG3-201ENST00000298537 TYSND1Q2T9J0 566 aa25.62■■□□□ 1.69
SDCCAG3-201ENST00000298537 CLNKQ7Z7G1 428 aa25.62■■□□□ 1.69
SDCCAG3-201ENST00000298537 OR2AP1Q8NGE2 309 aa25.62■■□□□ 1.69
SDCCAG3-201ENST00000298537 UBXN10Q96LJ8 280 aa25.62■■□□□ 1.69
SDCCAG3-201ENST00000298537 TMEM237Q96Q45 408 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms