RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 SCHIP1Q9P0W5 487 aaPredicted RBP6.69□□□□□ -1.34
TMC1-201ENST00000297784 UXTQ9UBK9 157 aaPredicted RBP6.69□□□□□ -1.34
TMC1-201ENST00000297784 PCDHGB4Q9UN71 923 aa6.69□□□□□ -1.34
TMC1-201ENST00000297784 PCDHGB5Q9Y5G0 923 aa6.69□□□□□ -1.34
TMC1-201ENST00000297784 H7C0C1 242 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 TRDMT1O14717 391 aaKnown RBP6.68□□□□□ -1.34
TMC1-201ENST00000297784 MAFKO60675 156 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 ADAM23O75077 832 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 BANF1O75531 89 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 GCATO75600 419 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 BMP10O95393 424 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 PEX11BO96011 259 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 INHBAP08476 426 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 HMOX2P30519 316 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 CORO1AP31146 461 aaKnown RBP6.68□□□□□ -1.34
TMC1-201ENST00000297784 ATP5OP48047 213 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 NTHL1P78549 312 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 CHI3L2Q15782 390 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 ZNF829Q3KNS6 432 aaPredicted RBP6.68□□□□□ -1.34
TMC1-201ENST00000297784 CCDC153Q494R4 210 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 PPM1LQ5SGD2 360 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 NIPAL1Q6NVV3 410 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 DCDC5Q6ZRR9 648 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 CHERPQ8IWX8 916 aaKnown RBP6.68□□□□□ -1.34
TMC1-201ENST00000297784 TAB3Q8N5C8 712 aaPredicted RBP6.68□□□□□ -1.34
TMC1-201ENST00000297784 RTL3Q8N8U3 475 aaKnown RBP6.68□□□□□ -1.34
TMC1-201ENST00000297784 TSPAN14Q8NG11 270 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 TFB1MQ8WVM0 346 aaKnown RBP6.68□□□□□ -1.34
TMC1-201ENST00000297784 HTR3CQ8WXA8 447 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 CNBD2Q96M20 576 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 RILPQ96NA2 401 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 SAMD11Q96NU1 681 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 NEURL2Q9BR09 285 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 CEP41Q9BYV8 373 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 TMEM248Q9NWD8 314 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 DNAJC28Q9NX36 388 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 SMPD4Q9NXE4 827 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 VPS28Q9UK41 221 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 PRPF19Q9UMS4 504 aaKnown RBP6.68□□□□□ -1.34
TMC1-201ENST00000297784 NUP210Q8TEM1 1887 aaPredicted RBP6.68□□□□□ -1.34
TMC1-201ENST00000297784 CCDC195A0A1B0GUA6 201 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 KCNK1O00180 336 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 ACSL4O60488 711 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 PROCP04070 461 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 BPGMP07738 259 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 RHOP08100 348 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 HDCP19113 662 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 CD68P34810 354 aaPredicted RBP6.68□□□□□ -1.34
TMC1-201ENST00000297784 STT3AP46977 705 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 ZNF135P52742 658 aaPredicted RBP6.68□□□□□ -1.34
TMC1-201ENST00000297784 EPHB1P54762 984 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 ZBTB17Q13105 803 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 TAF12Q16514 161 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 CDHR3Q6ZTQ4 885 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 TFAP2DQ7Z6R9 452 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 SLC26A11Q86WA9 606 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 NUDCD3Q8IVD9 361 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 TDHQ8IZJ6 230 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 POU5F2Q8N7G0 328 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 C12orf76Q8N812 135 aaPredicted RBP6.68□□□□□ -1.34
TMC1-201ENST00000297784 HM13Q8TCT9 377 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 CHPT1Q8WUD6 406 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 RSAD2Q8WXG1 361 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 HDAC11Q96DB2 347 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 LRGUKQ96M69 825 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 NUF2Q9BZD4 464 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 ATXN3LQ9H3M9 355 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 TRPC7Q9HCX4 862 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 BCAP29Q9UHQ4 241 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 APPL1Q9UKG1 709 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 CROTQ9UKG9 612 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 IKBKGQ9Y6K9 419 aa6.68□□□□□ -1.34
TMC1-201ENST00000297784 PRRC2BQ5JSZ5 2229 aaKnown RBP6.67□□□□□ -1.34
TMC1-201ENST00000297784 FGF10O15520 208 aaPredicted RBP6.67□□□□□ -1.34
TMC1-201ENST00000297784 SIN3BO75182 1162 aa6.67□□□□□ -1.34
TMC1-201ENST00000297784 TMEM63AO94886 807 aa6.67□□□□□ -1.34
TMC1-201ENST00000297784 GLP2RO95838 553 aa6.67□□□□□ -1.34
TMC1-201ENST00000297784 APOEP02649 317 aa6.67□□□□□ -1.34
TMC1-201ENST00000297784 C1QAP02745 245 aa6.67□□□□□ -1.34
TMC1-201ENST00000297784 SNRPAP09012 282 aaKnown RBP6.67□□□□□ -1.34
TMC1-201ENST00000297784 IRF1P10914 325 aa6.67□□□□□ -1.34
TMC1-201ENST00000297784 TACR2P21452 398 aa6.67□□□□□ -1.34
TMC1-201ENST00000297784 HOXA9P31269 272 aa6.67□□□□□ -1.34
TMC1-201ENST00000297784 HTR7P34969 479 aa6.67□□□□□ -1.34
TMC1-201ENST00000297784 NRIP1P48552 1158 aa6.67□□□□□ -1.34
TMC1-201ENST00000297784 NUMBP49757 651 aa6.67□□□□□ -1.34
TMC1-201ENST00000297784 KPNA1P52294 538 aaPredicted RBP6.67□□□□□ -1.34
TMC1-201ENST00000297784 RPS3AP61247 264 aaKnown RBP6.67□□□□□ -1.34
TMC1-201ENST00000297784 RPS24P62847 133 aaKnown RBP6.67□□□□□ -1.34
TMC1-201ENST00000297784 SLC7A9P82251 487 aa6.67□□□□□ -1.34
TMC1-201ENST00000297784 KCNJ11Q14654 390 aa6.67□□□□□ -1.34
TMC1-201ENST00000297784 C16orf72Q14CZ0 275 aa6.67□□□□□ -1.34
TMC1-201ENST00000297784 DUSP6Q16828 381 aa6.67□□□□□ -1.34
TMC1-201ENST00000297784 ZNF362Q5T0B9 420 aaPredicted RBP6.67□□□□□ -1.34
TMC1-201ENST00000297784 PDE12Q6L8Q7 609 aaKnown RBP6.67□□□□□ -1.34
TMC1-201ENST00000297784 NEPROQ6NW34 567 aa6.67□□□□□ -1.34
TMC1-201ENST00000297784 IYDQ6PHW0 289 aa6.67□□□□□ -1.34
TMC1-201ENST00000297784 RTL10Q7L3V2 364 aa6.67□□□□□ -1.34
TMC1-201ENST00000297784 AMIGO2Q86SJ2 522 aa6.67□□□□□ -1.34
TMC1-201ENST00000297784 WDR75Q8IWA0 830 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms