RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 RABIFP47224 123 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 SKOR1P84550 965 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 LRRC14Q15048 493 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 ACOX1Q15067 660 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 PSAPL1Q6NUJ1 521 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 LIPIQ6XZB0 460 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 DPPA4Q7L190 304 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 ZNF572Q7Z3I7 529 aaPredicted RBP12.12□□□□□ -0.47
HMGB2-201ENST00000296503 ABI3BPQ7Z7G0 1075 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 OXR1Q8N573 874 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 DENND6BQ8NEG7 585 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 FAM76AQ8TAV0 307 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 RHBDD1Q8TEB9 315 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 SCRN2Q96FV2 425 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 ERVMER34-1Q9H9K5 563 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 MBNL1Q9NR56 388 aaKnown RBP12.12□□□□□ -0.47
HMGB2-201ENST00000296503 B4GALT6Q9UBX8 382 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 CNOT1A5YKK6 2376 aaKnown RBP12.12□□□□□ -0.47
HMGB2-201ENST00000296503 HACD1B0YJ81 288 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 GIPC1O14908 333 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 DDX3YO15523 660 aaKnown RBP12.12□□□□□ -0.47
HMGB2-201ENST00000296503 MTSS1O43312 755 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 ITGAVP06756 1048 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 CEACAM1P13688 526 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 PTPN3P26045 913 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 VIPR1P32241 457 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 OTUD4Q01804 1114 aaKnown RBP12.12□□□□□ -0.47
HMGB2-201ENST00000296503 BNIP3Q12983 259 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 ARHGEF7Q14155 803 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 IHHQ14623 411 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 PRKD1Q15139 912 aaPredicted RBP12.12□□□□□ -0.47
HMGB2-201ENST00000296503 CCNI2Q6ZMN8 369 aaPredicted RBP12.12□□□□□ -0.47
HMGB2-201ENST00000296503 USP45Q70EL2 814 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 ERMP1Q7Z2K6 904 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 PID1Q7Z2X4 250 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 PIP4P1Q86T03 277 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 NAXDQ8IW45 347 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 ACTL9Q8TC94 416 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 PIH1D2Q8WWB5 315 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 HTR3CQ8WXA8 447 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 SPOCK2Q92563 424 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 CAMK1GQ96NX5 476 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 RBM15Q96T37 977 aaKnown RBP eCLIP12.12□□□□□ -0.479e-16■■■■□ 20.3
HMGB2-201ENST00000296503 SH3GL2Q99962 352 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 FERMT1Q9BQL6 677 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 HERPUD2Q9BSE4 406 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 PCDH9Q9HC56 1237 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 PCDHGB2Q9Y5G2 931 aa12.12□□□□□ -0.47
HMGB2-201ENST00000296503 TMEM131Q92545 1883 aa12.11□□□□□ -0.47
HMGB2-201ENST00000296503 FZD6O60353 706 aa12.11□□□□□ -0.47
HMGB2-201ENST00000296503 RECQL5O94762 991 aaPredicted RBP12.11□□□□□ -0.47
HMGB2-201ENST00000296503 ALPIP09923 528 aa12.11□□□□□ -0.47
HMGB2-201ENST00000296503 RHOXF2BP0C7M4 288 aa12.11□□□□□ -0.47
HMGB2-201ENST00000296503 PTPN7P35236 360 aa12.11□□□□□ -0.47
HMGB2-201ENST00000296503 HNF1BP35680 557 aa12.11□□□□□ -0.47
HMGB2-201ENST00000296503 THOP1P52888 689 aa12.11□□□□□ -0.47
HMGB2-201ENST00000296503 RALGDSQ12967 914 aa12.11□□□□□ -0.47
HMGB2-201ENST00000296503 XRCC4Q13426 336 aa12.11□□□□□ -0.47
HMGB2-201ENST00000296503 PDE1CQ14123 709 aaPredicted RBP12.11□□□□□ -0.47
HMGB2-201ENST00000296503 PTPRRQ15256 657 aa12.11□□□□□ -0.47
HMGB2-201ENST00000296503 WSCD2Q2TBF2 565 aa12.11□□□□□ -0.47
HMGB2-201ENST00000296503 KYAT3Q6YP21 454 aaKnown RBP12.11□□□□□ -0.47
HMGB2-201ENST00000296503 KDELC2Q7Z4H8 507 aa12.11□□□□□ -0.47
HMGB2-201ENST00000296503 GATAD2AQ86YP4 633 aa12.11□□□□□ -0.47
HMGB2-201ENST00000296503 TP53I13Q8NBR0 393 aaPredicted RBP12.11□□□□□ -0.47
HMGB2-201ENST00000296503 HES6Q96HZ4 224 aa12.11□□□□□ -0.47
HMGB2-201ENST00000296503 TEKT5Q96M29 485 aa12.11□□□□□ -0.47
HMGB2-201ENST00000296503 ALS2CR12Q96Q35 445 aa12.11□□□□□ -0.47
HMGB2-201ENST00000296503 RHOXF2Q9BQY4 288 aa12.11□□□□□ -0.47
HMGB2-201ENST00000296503 TDRD1Q9BXT4 1180 aaKnown RBP12.11□□□□□ -0.47
HMGB2-201ENST00000296503 SLC25A51Q9H1U9 297 aa12.11□□□□□ -0.47
HMGB2-201ENST00000296503 GLOD4Q9HC38 313 aa12.11□□□□□ -0.47
HMGB2-201ENST00000296503 KLHL8Q9P2G9 620 aaPredicted RBP12.11□□□□□ -0.47
HMGB2-201ENST00000296503 PPIL1Q9Y3C6 166 aa12.11□□□□□ -0.47
HMGB2-201ENST00000296503 EIF3HO15372 352 aaKnown RBP eCLIP12.1□□□□□ -0.475e-6■□□□□ 8.9
HMGB2-201ENST00000296503 YKT6O15498 198 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 FLRT2O43155 660 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 OPA1O60313 960 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 PCDHGA12O60330 932 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 MMP2P08253 660 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 IGFALSP35858 605 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 RXRGP48443 463 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 EIF3EP60228 445 aaKnown RBP12.1□□□□□ -0.47
HMGB2-201ENST00000296503 WASHC5Q12768 1159 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 PTK2BQ14289 1009 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 NOMO1Q15155 1222 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 IRF4Q15306 451 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 PCSK7Q16549 785 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 ZNF542PQ5EBM4 170 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 DARS2Q6PI48 645 aaKnown RBP12.1□□□□□ -0.47
HMGB2-201ENST00000296503 KDM7AQ6ZMT4 941 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 DBX2Q6ZNG2 339 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 SLC22A18ASQ8N1D0 253 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 NOA1Q8NC60 698 aaKnown RBP12.1□□□□□ -0.47
HMGB2-201ENST00000296503 LPCAT1Q8NF37 534 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 IMP4Q96G21 291 aaKnown RBP12.1□□□□□ -0.47
HMGB2-201ENST00000296503 FAM118BQ9BPY3 351 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 ADGRE3Q9BY15 652 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 CXorf56Q9H5V9 222 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 C10orf88Q9H8K7 445 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms