RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 VPS4AQ9UN37 437 aa17.24■□□□□ 0.35
CDCP1-201ENST00000296129 HTR7P34969 479 aa17.24■□□□□ 0.35
CDCP1-201ENST00000296129 ATXN1P54253 815 aaKnown RBP17.24■□□□□ 0.35
CDCP1-201ENST00000296129 DHDDSQ86SQ9 333 aa17.24■□□□□ 0.35
CDCP1-201ENST00000296129 LDB1Q86U70 411 aaPredicted RBP17.24■□□□□ 0.35
CDCP1-201ENST00000296129 UPF1Q92900 1129 aaKnown RBP eCLIP17.24■□□□□ 0.352e-6■■□□□ 12
CDCP1-201ENST00000296129 NXNL1Q96CM4 212 aa17.24■□□□□ 0.35
CDCP1-201ENST00000296129 PTCD3Q96EY7 689 aaKnown RBP17.24■□□□□ 0.35
CDCP1-201ENST00000296129 NPAS2Q99743 824 aa17.24■□□□□ 0.35
CDCP1-201ENST00000296129 RPS6KA6Q9UK32 745 aa17.24■□□□□ 0.35
CDCP1-201ENST00000296129 RPTORQ8N122 1335 aa17.24■□□□□ 0.35
CDCP1-201ENST00000296129 MYL12BO14950 172 aa17.24■□□□□ 0.35
CDCP1-201ENST00000296129 TRIM24O15164 1050 aa17.24■□□□□ 0.35
CDCP1-201ENST00000296129 PRKCZQ05513 592 aa17.24■□□□□ 0.35
CDCP1-201ENST00000296129 INAQ16352 499 aa17.24■□□□□ 0.35
CDCP1-201ENST00000296129 FBXW8Q8N3Y1 598 aa17.24■□□□□ 0.35
CDCP1-201ENST00000296129 EMID1Q96A84 441 aaPredicted RBP17.24■□□□□ 0.35
CDCP1-201ENST00000296129 C6orf62Q9GZU0 229 aaPredicted RBP17.24■□□□□ 0.35
CDCP1-201ENST00000296129 HMGXB4Q9UGU5 601 aa17.24■□□□□ 0.35
CDCP1-201ENST00000296129 ADAM30Q9UKF2 790 aa17.24■□□□□ 0.35
CDCP1-201ENST00000296129 DAOAP59103 153 aa17.24■□□□□ 0.35
CDCP1-201ENST00000296129 VARS2Q5ST30 1063 aaKnown RBP17.24■□□□□ 0.35
CDCP1-201ENST00000296129 ADGRD1Q6QNK2 874 aa17.24■□□□□ 0.35
CDCP1-201ENST00000296129 ARL8BQ9NVJ2 186 aa17.24■□□□□ 0.35
CDCP1-201ENST00000296129 ASF1AQ9Y294 204 aa17.24■□□□□ 0.35
CDCP1-201ENST00000296129 ACSL4O60488 711 aa17.24■□□□□ 0.35
CDCP1-201ENST00000296129 SLC35G4P0C7Q5 338 aa17.24■□□□□ 0.35
CDCP1-201ENST00000296129 MYL12AP19105 171 aa17.24■□□□□ 0.35
CDCP1-201ENST00000296129 MAGEA10P43363 369 aaPredicted RBP17.24■□□□□ 0.35
CDCP1-201ENST00000296129 CCL14Q16627 93 aa17.24■□□□□ 0.35
CDCP1-201ENST00000296129 GSTA3Q16772 222 aa17.24■□□□□ 0.35
CDCP1-201ENST00000296129 RASAL3Q86YV0 1011 aa17.24■□□□□ 0.35
CDCP1-201ENST00000296129 COLGALT2Q8IYK4 626 aa17.24■□□□□ 0.35
CDCP1-201ENST00000296129 SLAIN1Q8ND83 568 aa17.24■□□□□ 0.35
CDCP1-201ENST00000296129 PTCD2Q8WV60 388 aaKnown RBP17.24■□□□□ 0.35
CDCP1-201ENST00000296129 ZW10O43264 779 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 L1CAMP32004 1257 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 TMED10P49755 219 aaKnown RBP17.23■□□□□ 0.35
CDCP1-201ENST00000296129 GRM3Q14832 879 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 ZIK1Q3SY52 487 aaPredicted RBP17.23■□□□□ 0.35
CDCP1-201ENST00000296129 SH3PXD2AQ5TCZ1 1133 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 TRAF7Q6Q0C0 670 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 PAGE2Q7Z2X7 111 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 FAM124AQ86V42 546 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 AADATQ8N5Z0 425 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 GRIP2Q9C0E4 1043 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 WDR55Q9H6Y2 383 aaPredicted RBP17.23■□□□□ 0.35
CDCP1-201ENST00000296129 ATP6V1HQ9UI12 483 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 HADHBP55084 474 aaKnown RBP17.23■□□□□ 0.35
CDCP1-201ENST00000296129 GDF10P55107 478 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 SP2Q02086 613 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 PRKG2Q13237 762 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 DLG2Q15700 870 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 INO80DQ53TQ3 878 aaPredicted RBP17.23■□□□□ 0.35
CDCP1-201ENST00000296129 SH3GL2Q99962 352 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 DDX18Q9NVP1 670 aaKnown RBP17.23■□□□□ 0.35
CDCP1-201ENST00000296129 NDST3O95803 873 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 BNIP2Q12982 314 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 ZFP28Q8NHY6 868 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 CEP44Q9C0F1 390 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 TNKS2Q9H2K2 1166 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 CORO2BQ9UQ03 480 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 ANGPT4Q9Y264 503 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 TCAF1Q9Y4C2 921 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 KCNU1A8MYU2 1149 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 MATN3O15232 486 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 UGT2B4P06133 528 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 CDH4P55283 916 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 GK5Q6ZS86 529 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 GET4Q7L5D6 327 aaPredicted RBP17.23■□□□□ 0.35
CDCP1-201ENST00000296129 DGCR6LQ9BY27 220 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 PSME2Q9UL46 239 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 ZNF142P52746 1687 aaPredicted RBP17.23■□□□□ 0.35
CDCP1-201ENST00000296129 FYNP06241 537 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 KRR1Q13601 381 aaKnown RBP17.23■□□□□ 0.35
CDCP1-201ENST00000296129 ANKRD49Q8WVL7 239 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 TEKT5Q96M29 485 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 GTF2IRD1Q9UHL9 959 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 FBXW11Q9UKB1 542 aa17.23■□□□□ 0.35
CDCP1-201ENST00000296129 CXCR3P49682 368 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 CA9Q16790 459 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 GPAT3Q53EU6 434 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 ZNF544Q6NX49 715 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 OTOP2Q7RTS6 562 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 GPR180Q86V85 440 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 MFSD3Q96ES6 412 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 PANX1Q96RD7 426 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 A0A087WXM4 84 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 SLC22A3O75751 556 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 PKMP14618 531 aaKnown RBP17.22■□□□□ 0.35
CDCP1-201ENST00000296129 CHN2P52757 468 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 SPIRE1Q08AE8 756 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 CHST9Q7L1S5 443 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 OR7D4Q8NG98 312 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 CAPNS2Q96L46 248 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 OR52E6Q96RD3 313 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.22■□□□□ 0.35
CDCP1-201ENST00000296129 ISM1B1AKI9 464 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 CCL22O00626 93 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 IPO13O94829 963 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms