RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 PNLIPP16233 465 aa19.64■□□□□ 0.73
CXCL3-201ENST00000296026 CR2P20023 1033 aa19.64■□□□□ 0.73
CXCL3-201ENST00000296026 HSPA9P38646 679 aaKnown RBP19.64■□□□□ 0.73
CXCL3-201ENST00000296026 HLTFQ14527 1009 aaKnown RBP eCLIP19.64■□□□□ 0.73
CXCL3-201ENST00000296026 CNGA3Q16281 694 aa19.64■□□□□ 0.73
CXCL3-201ENST00000296026 BOLA3Q53S33 107 aa19.64■□□□□ 0.73
CXCL3-201ENST00000296026 DENND2CQ68D51 928 aa19.64■□□□□ 0.73
CXCL3-201ENST00000296026 SPECC1LQ69YQ0 1117 aa19.64■□□□□ 0.73
CXCL3-201ENST00000296026 POLNQ7Z5Q5 900 aa19.64■□□□□ 0.73
CXCL3-201ENST00000296026 PGBD5Q8N414 524 aa19.64■□□□□ 0.73
CXCL3-201ENST00000296026 NAP1L5Q96NT1 182 aaPredicted RBP19.64■□□□□ 0.73
CXCL3-201ENST00000296026 NUDCD1Q96RS6 583 aa19.64■□□□□ 0.73
CXCL3-201ENST00000296026 ISCUQ9H1K1 167 aa19.64■□□□□ 0.73
CXCL3-201ENST00000296026 WDR70Q9NW82 654 aa19.64■□□□□ 0.73
CXCL3-201ENST00000296026 RNF215Q9Y6U7 377 aa19.64■□□□□ 0.73
CXCL3-201ENST00000296026 A0A1B0GTH6 734 aa19.63■□□□□ 0.73
CXCL3-201ENST00000296026 MAFKO60675 156 aa19.63■□□□□ 0.73
CXCL3-201ENST00000296026 JMJD7P0C870 316 aa19.63■□□□□ 0.73
CXCL3-201ENST00000296026 VIPR1P32241 457 aa19.63■□□□□ 0.73
CXCL3-201ENST00000296026 ARHGEF7Q14155 803 aa19.63■□□□□ 0.73
CXCL3-201ENST00000296026 LY6DQ14210 128 aa19.63■□□□□ 0.73
CXCL3-201ENST00000296026 TSR1Q2NL82 804 aaKnown RBP19.63■□□□□ 0.73
CXCL3-201ENST00000296026 KIAA1614Q5VZ46 1190 aa19.63■□□□□ 0.73
CXCL3-201ENST00000296026 SPRED1Q7Z699 444 aa19.63■□□□□ 0.73
CXCL3-201ENST00000296026 BBS5Q8N3I7 341 aa19.63■□□□□ 0.73
CXCL3-201ENST00000296026 CSPG4P5Q96PW8 444 aa19.63■□□□□ 0.73
CXCL3-201ENST00000296026 CCNL2Q96S94 520 aaPredicted RBP19.63■□□□□ 0.73
CXCL3-201ENST00000296026 SUDS3Q9H7L9 328 aaPredicted RBP19.63■□□□□ 0.73
CXCL3-201ENST00000296026 CARS2Q9HA77 564 aaKnown RBP19.63■□□□□ 0.73
CXCL3-201ENST00000296026 NOD2Q9HC29 1040 aa19.63■□□□□ 0.73
CXCL3-201ENST00000296026 PHPT1Q9NRX4 125 aaPredicted RBP19.63■□□□□ 0.73
CXCL3-201ENST00000296026 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.63■□□□□ 0.73
CXCL3-201ENST00000296026 PISDQ9UG56 409 aa19.63■□□□□ 0.73
CXCL3-201ENST00000296026 KALRNO60229 2985 aa19.63■□□□□ 0.73
CXCL3-201ENST00000296026 AGRPO00253 132 aa19.62■□□□□ 0.73
CXCL3-201ENST00000296026 NUDT21O43809 227 aaKnown RBP19.62■□□□□ 0.73
CXCL3-201ENST00000296026 HEXIM1O94992 359 aaKnown RBP19.62■□□□□ 0.73
CXCL3-201ENST00000296026 RARAP10276 462 aa19.62■□□□□ 0.73
CXCL3-201ENST00000296026 NFKBIAP25963 317 aa19.62■□□□□ 0.73
CXCL3-201ENST00000296026 MAXP61244 160 aa19.62■□□□□ 0.73
CXCL3-201ENST00000296026 ZFP36L1Q07352 338 aaKnown RBP19.62■□□□□ 0.73
CXCL3-201ENST00000296026 TRAF2Q12933 501 aa19.62■□□□□ 0.73
CXCL3-201ENST00000296026 TXNRD3NBQ6F5E7 133 aa19.62■□□□□ 0.73
CXCL3-201ENST00000296026 HEATR4Q86WZ0 1026 aa19.62■□□□□ 0.73
CXCL3-201ENST00000296026 ATPAF2Q8N5M1 289 aa19.62■□□□□ 0.73
CXCL3-201ENST00000296026 KIAA1524Q8TCG1 905 aa19.62■□□□□ 0.73
CXCL3-201ENST00000296026 MGME1Q9BQP7 344 aa19.62■□□□□ 0.73
CXCL3-201ENST00000296026 TEX101Q9BY14 249 aa19.62■□□□□ 0.73
CXCL3-201ENST00000296026 SEMA4CQ9C0C4 833 aa19.62■□□□□ 0.73
CXCL3-201ENST00000296026 SPATS2LQ9NUQ6 558 aaKnown RBP19.62■□□□□ 0.73
CXCL3-201ENST00000296026 KCTD5Q9NXV2 234 aa19.62■□□□□ 0.73
CXCL3-201ENST00000296026 PHTF1Q9UMS5 762 aa19.62■□□□□ 0.73
CXCL3-201ENST00000296026 LOXL2Q9Y4K0 774 aa19.62■□□□□ 0.73
CXCL3-201ENST00000296026 CYP2A6P11509 494 aaPredicted RBP19.61■□□□□ 0.73
CXCL3-201ENST00000296026 CCNB1P14635 433 aa19.61■□□□□ 0.73
CXCL3-201ENST00000296026 LHCGRP22888 699 aa19.61■□□□□ 0.73
CXCL3-201ENST00000296026 ETV3P41162 512 aa19.61■□□□□ 0.73
CXCL3-201ENST00000296026 ZNF165P49910 485 aa19.61■□□□□ 0.73
CXCL3-201ENST00000296026 PIGHQ14442 188 aaPredicted RBP19.61■□□□□ 0.73
CXCL3-201ENST00000296026 HSD11B1LQ7Z5J1 315 aa19.61■□□□□ 0.73
CXCL3-201ENST00000296026 CBARPQ8N350 705 aaPredicted RBP19.61■□□□□ 0.73
CXCL3-201ENST00000296026 GPBAR1Q8TDU6 330 aa19.61■□□□□ 0.73
CXCL3-201ENST00000296026 NSMCE1Q8WV22 266 aa19.61■□□□□ 0.73
CXCL3-201ENST00000296026 DTD2Q96FN9 168 aa19.61■□□□□ 0.73
CXCL3-201ENST00000296026 ACSL6Q9UKU0 697 aa19.61■□□□□ 0.73
CXCL3-201ENST00000296026 GOLGA6CA6NDK9 693 aa19.6■□□□□ 0.73
CXCL3-201ENST00000296026 GOLGA6BA6NDN3 693 aa19.6■□□□□ 0.73
CXCL3-201ENST00000296026 NPIPB15A6NHN6 443 aaPredicted RBP19.6■□□□□ 0.73
CXCL3-201ENST00000296026 NVLO15381 856 aaKnown RBP19.6■□□□□ 0.73
CXCL3-201ENST00000296026 EFSO43281 561 aa19.6■□□□□ 0.73
CXCL3-201ENST00000296026 SERPINC1P01008 464 aa19.6■□□□□ 0.73
CXCL3-201ENST00000296026 FUCA1P04066 466 aa19.6■□□□□ 0.73
CXCL3-201ENST00000296026 CEACAM5P06731 702 aa19.6■□□□□ 0.73
CXCL3-201ENST00000296026 GOLGA6DP0CG33 693 aa19.6■□□□□ 0.73
CXCL3-201ENST00000296026 ITIH1P19827 911 aa19.6■□□□□ 0.73
CXCL3-201ENST00000296026 SERPINB6P35237 376 aa19.6■□□□□ 0.73
CXCL3-201ENST00000296026 MMP13P45452 471 aa19.6■□□□□ 0.73
CXCL3-201ENST00000296026 CDH6P55285 790 aa19.6■□□□□ 0.73
CXCL3-201ENST00000296026 MAZP56270 477 aaKnown RBP19.6■□□□□ 0.73
CXCL3-201ENST00000296026 CDK3Q00526 305 aa19.6■□□□□ 0.73
CXCL3-201ENST00000296026 B4GALNT1Q00973 533 aa19.6■□□□□ 0.73
CXCL3-201ENST00000296026 ILF3Q12906 894 aaKnown RBP eCLIP19.6■□□□□ 0.73
CXCL3-201ENST00000296026 NR1I3Q14994 352 aa19.6■□□□□ 0.73
CXCL3-201ENST00000296026 PTPRRQ15256 657 aa19.6■□□□□ 0.73
CXCL3-201ENST00000296026 TGIF1Q15583 401 aa19.6■□□□□ 0.73
CXCL3-201ENST00000296026 TDRD12Q587J7 1177 aaKnown RBP19.6■□□□□ 0.73
CXCL3-201ENST00000296026 RALGPS1Q5JS13 557 aa19.6■□□□□ 0.73
CXCL3-201ENST00000296026 MARC1Q5VT66 337 aa19.6■□□□□ 0.73
CXCL3-201ENST00000296026 Q6ZVL8 140 aa19.6■□□□□ 0.73
CXCL3-201ENST00000296026 TMPRSS9Q7Z410 1059 aa19.6■□□□□ 0.73
CXCL3-201ENST00000296026 NRROSQ86YC3 692 aa19.6■□□□□ 0.73
CXCL3-201ENST00000296026 TEKT4Q8WW24 435 aa19.6■□□□□ 0.73
CXCL3-201ENST00000296026 TMEM159Q96B96 161 aa19.6■□□□□ 0.73
CXCL3-201ENST00000296026 SCRN2Q96FV2 425 aa19.6■□□□□ 0.73
CXCL3-201ENST00000296026 GSDMCQ9BYG8 508 aa19.6■□□□□ 0.73
CXCL3-201ENST00000296026 FRMD8Q9BZ67 464 aaPredicted RBP19.6■□□□□ 0.73
CXCL3-201ENST00000296026 PCDH18Q9HCL0 1135 aa19.6■□□□□ 0.73
CXCL3-201ENST00000296026 GOLGA6AQ9NYA3 693 aa19.6■□□□□ 0.73
CXCL3-201ENST00000296026 SCN8AQ9UQD0 1980 aa19.6■□□□□ 0.73
CXCL3-201ENST00000296026 PSMD11O00231 422 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms