RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 VIPR1P32241 457 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 MMP12P39900 470 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 CCR3P51677 355 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 PTSQ03393 145 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 ZBTB16Q05516 673 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 CNGA3Q16281 694 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 DNAJC21Q5F1R6 531 aaKnown RBP15.16■□□□□ 0.02
CCDC140-201ENST00000295226 ERAP2Q6P179 960 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 RASSF3Q86WH2 238 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 FBXO36Q8NEA4 188 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 OR13C4Q8NGS5 318 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 CFAP36Q96G28 342 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 FCRL3Q96P31 734 aaPredicted RBP15.16■□□□□ 0.02
CCDC140-201ENST00000295226 ZIM3Q96PE6 472 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 IL22Q9GZX6 179 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 ZFYVE1Q9HBF4 777 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 NCKAP1Q9Y2A7 1128 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 FNDC3AQ9Y2H6 1198 aaKnown RBP15.16■□□□□ 0.02
CCDC140-201ENST00000295226 TEX264Q9Y6I9 313 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 BPTFQ12830 3046 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 E7ESA3 106 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 PCDH8O95206 1070 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 C7P10643 843 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 ADRA1DP25100 572 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 MAGEA4P43358 317 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 MAGEA9P43362 315 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 LIG3P49916 1009 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 ADPRHP54922 357 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 PCID2Q5JVF3 399 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 ESRP1Q6NXG1 681 aaKnown RBP15.16■□□□□ 0.02
CCDC140-201ENST00000295226 LIPIQ6XZB0 460 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 DPPA4Q7L190 304 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 HSD11B1LQ7Z5J1 315 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 FBXL6Q8N531 539 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 PPHLN1Q8NEY8 458 aaKnown RBP15.16■□□□□ 0.02
CCDC140-201ENST00000295226 OR4K2Q8NGD2 314 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 KLK6Q92876 244 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 MFSD3Q96ES6 412 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 STAMBPL1Q96FJ0 436 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 LYSMD1Q96S90 227 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 EBNA1BP2Q99848 306 aaKnown RBP15.16■□□□□ 0.02
CCDC140-201ENST00000295226 FRMD8Q9BZ67 464 aaPredicted RBP15.16■□□□□ 0.02
CCDC140-201ENST00000295226 PLAC1Q9HBJ0 212 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 C11orf16Q9NQ32 467 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 IL1RAPL1Q9NZN1 696 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 USP36Q9P275 1121 aaKnown RBP15.16■□□□□ 0.02
CCDC140-201ENST00000295226 SCML1Q9UN30 329 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 TCAF1Q9Y4C2 921 aa15.16■□□□□ 0.02
CCDC140-201ENST00000295226 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.16■□□□□ 0.02
CCDC140-201ENST00000295226 LRRK1Q38SD2 2015 aa15.15■□□□□ 0.02
CCDC140-201ENST00000295226 TBC1D3DA0A087WVF3 549 aa15.15■□□□□ 0.02
CCDC140-201ENST00000295226 TBC1D3IA0A087WXS9 549 aa15.15■□□□□ 0.02
CCDC140-201ENST00000295226 TBC1D3EA0A087X179 549 aa15.15■□□□□ 0.02
CCDC140-201ENST00000295226 TBC1D3KA0A087X1G2 549 aa15.15■□□□□ 0.02
CCDC140-201ENST00000295226 TBC1D3FA6NER0 549 aaPredicted RBP15.15■□□□□ 0.02
CCDC140-201ENST00000295226 MROH6A6NGR9 719 aa15.15■□□□□ 0.02
CCDC140-201ENST00000295226 TBC1D3LB9A6J9 549 aa15.15■□□□□ 0.02
CCDC140-201ENST00000295226 C1SP09871 688 aa15.15■□□□□ 0.02
CCDC140-201ENST00000295226 TBC1D3HP0C7X1 549 aa15.15■□□□□ 0.02
CCDC140-201ENST00000295226 CYP2A6P11509 494 aaPredicted RBP15.15■□□□□ 0.02
CCDC140-201ENST00000295226 ARHGEF7Q14155 803 aa15.15■□□□□ 0.02
CCDC140-201ENST00000295226 TAF1AQ15573 450 aaPredicted RBP15.15■□□□□ 0.02
CCDC140-201ENST00000295226 SEL1L3Q68CR1 1132 aa15.15■□□□□ 0.02
CCDC140-201ENST00000295226 TBC1D3GQ6DHY5 549 aa15.15■□□□□ 0.02
CCDC140-201ENST00000295226 TBC1D3CQ6IPX1 549 aa15.15■□□□□ 0.02
CCDC140-201ENST00000295226 USP30Q70CQ3 517 aa15.15■□□□□ 0.02
CCDC140-201ENST00000295226 TMC3Q7Z5M5 1100 aa15.15■□□□□ 0.02
CCDC140-201ENST00000295226 C1orf210Q8IVY1 113 aa15.15■□□□□ 0.02
CCDC140-201ENST00000295226 MAML2Q8IZL2 1156 aaPredicted RBP15.15■□□□□ 0.02
CCDC140-201ENST00000295226 TBC1D3Q8IZP1 549 aaPredicted RBP15.15■□□□□ 0.02
CCDC140-201ENST00000295226 CAMKK1Q8N5S9 505 aa15.15■□□□□ 0.02
CCDC140-201ENST00000295226 DTWD2Q8NBA8 298 aa15.15■□□□□ 0.02
CCDC140-201ENST00000295226 PYROXD1Q8WU10 500 aa15.15■□□□□ 0.02
CCDC140-201ENST00000295226 DNAJC1Q96KC8 554 aaKnown RBP15.15■□□□□ 0.02
CCDC140-201ENST00000295226 SAMD15Q9P1V8 674 aa15.15■□□□□ 0.02
CCDC140-201ENST00000295226 CD84Q9UIB8 345 aa15.15■□□□□ 0.02
CCDC140-201ENST00000295226 SOX13Q9UN79 622 aa15.15■□□□□ 0.02
CCDC140-201ENST00000295226 TRPM6Q9BX84 2022 aa15.14■□□□□ 0.02
CCDC140-201ENST00000295226 HEATR9A2RTY3 570 aa15.14■□□□□ 0.01
CCDC140-201ENST00000295226 IGLON5A6NGN9 336 aa15.14■□□□□ 0.01
CCDC140-201ENST00000295226 HMGB1P1B2RPK0 211 aaPredicted RBP15.14■□□□□ 0.01
CCDC140-201ENST00000295226 AP3B1O00203 1094 aa15.14■□□□□ 0.01
CCDC140-201ENST00000295226 LAMTOR5O43504 91 aa15.14■□□□□ 0.01
CCDC140-201ENST00000295226 PLRG1O43660 514 aaKnown RBP15.14■□□□□ 0.01
CCDC140-201ENST00000295226 ELFN1P0C7U0 828 aa15.14■□□□□ 0.01
CCDC140-201ENST00000295226 GM2AP17900 193 aa15.14■□□□□ 0.01
CCDC140-201ENST00000295226 MAT2AP31153 395 aaKnown RBP15.14■□□□□ 0.01
CCDC140-201ENST00000295226 ARSDP51689 593 aa15.14■□□□□ 0.01
CCDC140-201ENST00000295226 EIF3BP55884 814 aaKnown RBP15.14■□□□□ 0.01
CCDC140-201ENST00000295226 CSTF1Q05048 431 aaKnown RBP15.14■□□□□ 0.01
CCDC140-201ENST00000295226 ELP6Q0PNE2 266 aa15.14■□□□□ 0.01
CCDC140-201ENST00000295226 KYNUQ16719 465 aa15.14■□□□□ 0.01
CCDC140-201ENST00000295226 TSTD2Q5T7W7 516 aa15.14■□□□□ 0.01
CCDC140-201ENST00000295226 CROCCP2Q86T23 111 aa15.14■□□□□ 0.01
CCDC140-201ENST00000295226 UNC5BQ8IZJ1 945 aa15.14■□□□□ 0.01
CCDC140-201ENST00000295226 DEFB119Q8N690 84 aa15.14■□□□□ 0.01
CCDC140-201ENST00000295226 RAB7BQ96AH8 199 aa15.14■□□□□ 0.01
CCDC140-201ENST00000295226 FAM131CQ96AQ9 280 aa15.14■□□□□ 0.01
CCDC140-201ENST00000295226 TOE1Q96GM8 510 aaKnown RBP15.14■□□□□ 0.01
CCDC140-201ENST00000295226 IER2Q9BTL4 223 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms