RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 WDR12Q9GZL7 423 aaKnown RBP15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 COQ10BQ9H8M1 238 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 GSTK1Q9Y2Q3 226 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 E7ENX8 843 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 CABYRO75952 493 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 HNF4AP41235 474 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 SKIV2LQ15477 1246 aaKnown RBP15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 XKR6Q5GH73 641 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 DEF8Q6ZN54 512 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 TRAPPC5Q8IUR0 188 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 CFAP52Q8N1V2 620 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 C12orf50Q8NA57 414 aaPredicted RBP15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 OR6K2Q8NGY2 324 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 RFXANKO14593 260 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 TOR1BO14657 336 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 TGDSO95455 350 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 CCNE2O96020 404 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 RETSATQ6NUM9 610 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 ZYG11AQ6WRX3 759 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 BANPQ8N9N5 519 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 COL26A1Q96A83 441 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 REPS1Q96D71 796 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 MFSD3Q96ES6 412 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 TUBGCP5Q96RT8 1024 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 NOCTQ9UK39 431 aaKnown RBP15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 PRKAB1Q9Y478 270 aa15.35■□□□□ 0.05
SHROOM4-201ENST00000289292 LOC110117498-PIK3R3F6TDL0 507 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 METTL18O95568 372 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 NMBRP28336 390 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 TIMM50Q3ZCQ8 353 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 COMMD2Q86X83 199 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 KBTBD8Q8NFY9 601 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 MCFD2Q8NI22 146 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 YME1L1Q96TA2 773 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 ENOPH1Q9UHY7 261 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 CLEC4AQ9UMR7 237 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 ITM2AO43736 263 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 AXLP30530 894 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 MAPK9P45984 424 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 PRKG2Q13237 762 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 MPP5Q8N3R9 675 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 PHF10Q8WUB8 498 aaKnown RBP15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 CCNKO75909 580 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 POLR2JP52435 117 aaKnown RBP15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 ATXN1P54253 815 aaKnown RBP15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 IL18R1Q13478 541 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 GPAT3Q53EU6 434 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 PGAM4Q8N0Y7 254 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 STK40Q8N2I9 435 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 ZNF570Q96NI8 536 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 ADAM2Q99965 735 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 ALG2Q9H553 416 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 RTN3O95197 1032 aaPredicted RBP15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 WNT3AP56704 352 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 KLF1Q13351 362 aaPredicted RBP15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 MZT2AQ6P582 158 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 FAM131AQ6UXB0 335 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 TMEM86AQ8N2M4 240 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 CDK5RAP1Q96SZ6 601 aaKnown RBP15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 TMEM109Q9BVC6 243 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 DPEP3Q9H4B8 488 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 NXF3Q9H4D5 531 aaKnown RBP15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 RHOJQ9H4E5 214 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 WDR4P57081 412 aaKnown RBP15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 FOXR2Q6PJQ5 311 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 CATSPERGQ6ZRH7 1159 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 PTCHD4Q6ZW05 846 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 ANKS1BQ7Z6G8 1248 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 HSFY1Q96LI6 401 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 ABCB9Q9NP78 766 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 PTGFRNQ9P2B2 879 aa15.34■□□□□ 0.05
SHROOM4-201ENST00000289292 OR10H3O60404 316 aa15.33■□□□□ 0.05
SHROOM4-201ENST00000289292 ALOX5P09917 674 aa15.33■□□□□ 0.05
SHROOM4-201ENST00000289292 SMIM10L2AP0DMW4 78 aa15.33■□□□□ 0.05
SHROOM4-201ENST00000289292 SMIM10L2BP0DMW5 78 aa15.33■□□□□ 0.05
SHROOM4-201ENST00000289292 TRMT10BQ6PF06 316 aaKnown RBP15.33■□□□□ 0.05
SHROOM4-201ENST00000289292 KCTD8Q6ZWB6 473 aa15.33■□□□□ 0.05
SHROOM4-201ENST00000289292 SPATA22Q8NHS9 363 aa15.33■□□□□ 0.05
SHROOM4-201ENST00000289292 TINF2Q9BSI4 451 aa15.33■□□□□ 0.05
SHROOM4-201ENST00000289292 SPG21Q9NZD8 308 aa15.33■□□□□ 0.05
SHROOM4-201ENST00000289292 SLC5A3P53794 718 aa15.33■□□□□ 0.05
SHROOM4-201ENST00000289292 PPM1LQ5SGD2 360 aa15.33■□□□□ 0.05
SHROOM4-201ENST00000289292 SLC9A4Q6AI14 798 aa15.33■□□□□ 0.05
SHROOM4-201ENST00000289292 RNF44Q7L0R7 432 aa15.33■□□□□ 0.05
SHROOM4-201ENST00000289292 LPIN3Q9BQK8 851 aa15.33■□□□□ 0.05
SHROOM4-201ENST00000289292 ADARB2Q9NS39 739 aaKnown RBP15.33■□□□□ 0.05
SHROOM4-201ENST00000289292 CIDEBQ9UHD4 219 aa15.33■□□□□ 0.05
SHROOM4-201ENST00000289292 TRPV2Q9Y5S1 764 aa15.33■□□□□ 0.05
SHROOM4-201ENST00000289292 SPATA31C2B4DYI2 1134 aa15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 TBL1XO60907 577 aa15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 TCF4P15884 667 aa15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 TPSB2P20231 275 aa15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 ICAM3P32942 547 aa15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 VGLL4Q14135 290 aa15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 TPSAB1Q15661 275 aa15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 CLIP4Q8N3C7 705 aa15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 OR2T12Q8NG77 320 aa15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 ITCHQ96J02 903 aa15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 HBEGFQ99075 208 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms