RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 GDF6Q6KF10 455 aaPredicted RBP18.54■□□□□ 0.56
PCDH1-201ENST00000287008 ATP6AP2A0A1C7CYW4 349 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 C2CD4BA6NLJ0 364 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 ATP6AP2O75787 350 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 NOL4O94818 638 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 NUDT17P0C025 328 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 SOX6P35712 828 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 APLP1P51693 650 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 NDST2P52849 883 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 PKNOX1P55347 436 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 IZUMO2Q6UXV1 221 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 LEMD2Q8NC56 503 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 TBATAQ96M53 351 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 AIF1LQ9BQI0 150 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 ABCG8Q9H221 673 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 MMADHCQ9H3L0 296 aaPredicted RBP18.54■□□□□ 0.56
PCDH1-201ENST00000287008 COQ4Q9Y3A0 265 aa18.54■□□□□ 0.56
PCDH1-201ENST00000287008 MATN3O15232 486 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 HIST1H2ABP04908 130 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 COL6A1P12109 1028 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 ADSSP30520 456 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 FEN1P39748 380 aaKnown RBP18.53■□□□□ 0.56
PCDH1-201ENST00000287008 SQLEQ14534 574 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 HIST3H2AQ7L7L0 130 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 MREGQ8N565 214 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 HIST1H2ACQ93077 130 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 TMEM79Q9BSE2 394 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 KCND1Q9NSA2 647 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 NDUFA13Q9P0J0 144 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 SMNDC1O75940 238 aaKnown RBP eCLIP18.53■□□□□ 0.56
PCDH1-201ENST00000287008 HNRNPLP14866 589 aaKnown RBP eCLIP18.53■□□□□ 0.56
PCDH1-201ENST00000287008 UBXN2BQ14CS0 331 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 OASLQ15646 514 aaKnown RBP18.53■□□□□ 0.56
PCDH1-201ENST00000287008 PPP1R14AQ96A00 147 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 GMLQ99445 158 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 SLC4A5Q9BY07 1137 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 LZTS1Q9Y250 596 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 R3HDM2Q9Y2K5 976 aaKnown RBP18.53■□□□□ 0.56
PCDH1-201ENST00000287008 RNF225M0QZC1 329 aaPredicted RBP18.53■□□□□ 0.56
PCDH1-201ENST00000287008 AP2A1O95782 977 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 EPHX4Q8IUS5 362 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 CCDC185Q8N715 623 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 RNFT2Q96EX2 444 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 CLDND1Q9NY35 253 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 PHLPP1O60346 1717 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 ABCC6O95255 1503 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 A0A1W2PRU2 124 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 INSIG1O15503 277 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 CYP4F8P98187 520 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 IL10RBQ08334 325 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 LSM12Q3MHD2 195 aaKnown RBP18.53■□□□□ 0.56
PCDH1-201ENST00000287008 COMMD2Q86X83 199 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 WDR36Q8NI36 951 aaKnown RBP18.53■□□□□ 0.56
PCDH1-201ENST00000287008 FBXO30Q8TB52 745 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 RPL10LQ96L21 214 aaKnown RBP18.53■□□□□ 0.56
PCDH1-201ENST00000287008 QKIQ96PU8 341 aaKnown RBP eCLIP18.53■□□□□ 0.56
PCDH1-201ENST00000287008 WRAP53Q9BUR4 548 aaKnown RBP18.53■□□□□ 0.56
PCDH1-201ENST00000287008 GBA3Q9H227 469 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 ANAPC2Q9UJX6 822 aa18.53■□□□□ 0.56
PCDH1-201ENST00000287008 SLC31A1O15431 190 aa18.52■□□□□ 0.56
PCDH1-201ENST00000287008 WASHC2DQ5SRD0 308 aa18.52■□□□□ 0.56
PCDH1-201ENST00000287008 RNASEH2BQ5TBB1 312 aaKnown RBP18.52■□□□□ 0.56
PCDH1-201ENST00000287008 TAF8Q7Z7C8 310 aa18.52■□□□□ 0.56
PCDH1-201ENST00000287008 ADHFE1Q8IWW8 467 aa18.52■□□□□ 0.56
PCDH1-201ENST00000287008 OR6Y1Q8NGX8 325 aa18.52■□□□□ 0.56
PCDH1-201ENST00000287008 IL12RB2Q99665 862 aa18.52■□□□□ 0.56
PCDH1-201ENST00000287008 TRIT1Q9H3H1 467 aaKnown RBP18.52■□□□□ 0.56
PCDH1-201ENST00000287008 ANGPT4Q9Y264 503 aa18.52■□□□□ 0.56
PCDH1-201ENST00000287008 hCG_2014768A0A024R1R8 64 aa18.52■□□□□ 0.56
PCDH1-201ENST00000287008 FAM237BA0A1B0GVD1 139 aa18.52■□□□□ 0.56
PCDH1-201ENST00000287008 ERN1O75460 977 aaKnown RBP18.52■□□□□ 0.56
PCDH1-201ENST00000287008 PRAMEF1O95521 474 aa18.52■□□□□ 0.56
PCDH1-201ENST00000287008 CACNG1Q06432 222 aa18.52■□□□□ 0.56
PCDH1-201ENST00000287008 NID2Q14112 1375 aa18.52■□□□□ 0.56
PCDH1-201ENST00000287008 TAF5Q15542 800 aa18.52■□□□□ 0.56
PCDH1-201ENST00000287008 NPY5RQ15761 445 aa18.52■□□□□ 0.56
PCDH1-201ENST00000287008 SOWAHAQ2M3V2 549 aa18.52■□□□□ 0.56
PCDH1-201ENST00000287008 ALG11Q2TAA5 492 aa18.52■□□□□ 0.56
PCDH1-201ENST00000287008 ZC3H7AQ8IWR0 971 aaKnown RBP18.52■□□□□ 0.56
PCDH1-201ENST00000287008 DAW1Q8N136 415 aa18.52■□□□□ 0.56
PCDH1-201ENST00000287008 SH3RF2Q8TEC5 729 aa18.52■□□□□ 0.56
PCDH1-201ENST00000287008 SLC22A17Q8WUG5 538 aa18.52■□□□□ 0.56
PCDH1-201ENST00000287008 PANX1Q96RD7 426 aa18.52■□□□□ 0.56
PCDH1-201ENST00000287008 REXO2Q9Y3B8 237 aaKnown RBP18.52■□□□□ 0.56
PCDH1-201ENST00000287008 YIPF1Q9Y548 306 aa18.52■□□□□ 0.56
PCDH1-201ENST00000287008 ZNF780BQ9Y6R6 833 aa18.52■□□□□ 0.56
PCDH1-201ENST00000287008 TRBV23OR9-2A0A075B6M9 112 aa18.52■□□□□ 0.55
PCDH1-201ENST00000287008 CHURC1-FNTBB4DL54 471 aa18.52■□□□□ 0.55
PCDH1-201ENST00000287008 BIRC5O15392 142 aa18.52■□□□□ 0.55
PCDH1-201ENST00000287008 RASGRP1O95267 797 aa18.52■□□□□ 0.55
PCDH1-201ENST00000287008 RAB30Q15771 203 aa18.52■□□□□ 0.55
PCDH1-201ENST00000287008 PDK4Q16654 411 aa18.52■□□□□ 0.55
PCDH1-201ENST00000287008 GCNT7Q6ZNI0 430 aa18.52■□□□□ 0.55
PCDH1-201ENST00000287008 TCAIMQ8N3R3 496 aa18.52■□□□□ 0.55
PCDH1-201ENST00000287008 C9orf16Q9BUW7 83 aa18.52■□□□□ 0.55
PCDH1-201ENST00000287008 GABRB2P47870 512 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 GPAT3Q53EU6 434 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 VITQ6UXI7 678 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 CIR1Q86X95 450 aaPredicted RBP18.51■□□□□ 0.55
PCDH1-201ENST00000287008 SCAMP5Q8TAC9 235 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms