RNA–Protein interactions for RNA: ENST00000276062.8

NDUFB11-201, Transcript of NADH:ubiquinone oxidoreductase subunit B11, humanhuman

TSL 1 (best) BASIC

Gene NDUFB11, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB11-201ENST00000276062 CHRDQ9H2X0 955 aa13.24□□□□□ -0.29
NDUFB11-201ENST00000276062 LRRC4CQ9HCJ2 640 aa13.24□□□□□ -0.29
NDUFB11-201ENST00000276062 CD248Q9HCU0 757 aa13.24□□□□□ -0.29
NDUFB11-201ENST00000276062 PCDH12Q9NPG4 1184 aa13.24□□□□□ -0.29
NDUFB11-201ENST00000276062 RAD18Q9NS91 495 aa13.24□□□□□ -0.29
NDUFB11-201ENST00000276062 MTF2Q9Y483 593 aaPredicted RBP13.24□□□□□ -0.29
NDUFB11-201ENST00000276062 FAM169AQ9Y6X4 670 aa13.24□□□□□ -0.29
NDUFB11-201ENST00000276062 RGSL1A5PLK6 1076 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 PSMD11O00231 422 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 NEMP1O14524 444 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 TSPAN6O43657 245 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 LDB2O43679 373 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 AP1G1O43747 822 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 PIRTP0C851 137 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 STX2P32856 288 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 HMGCLP35914 325 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 HSD17B3P37058 310 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 P2RY2P41231 377 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 CNTN1Q12860 1018 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 CRYMQ14894 314 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 LONRF1Q17RB8 773 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 POM121L1PQ3SYA9 428 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 CRTC1Q6UUV9 634 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 TMEM92Q6UXU6 159 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 UNC5AQ6ZN44 842 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 Q6ZS52 159 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 IGDCC3Q8IVU1 814 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 CNPY4Q8N129 248 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 AGGF1Q8N302 714 aaeCLIP13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 FLCNQ8NFG4 579 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 MDGA1Q8NFP4 955 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 CDKL2Q92772 493 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 ZNF669Q96BR6 464 aaPredicted RBP13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 PKNOX2Q96KN3 472 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 MKRN2Q9H000 416 aaKnown RBP13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 NLE1Q9NVX2 485 aaPredicted RBP13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 FBXL12Q9NXK8 326 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 KCTD5Q9NXV2 234 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 B4GALT6Q9UBX8 382 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 FZD4Q9ULV1 537 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 SPO11Q9Y5K1 396 aa13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.23□□□□□ -0.29
NDUFB11-201ENST00000276062 CACNA1HO95180 2353 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 NPIPB15A6NHN6 443 aaPredicted RBP13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 GALR2O43603 387 aaPredicted RBP13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 RNASEH2AO75792 299 aaKnown RBP13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 RPP40O75818 363 aaKnown RBP13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 ACSL3O95573 720 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 PSMA3P25788 255 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 NMBRP28336 390 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 SSTR1P30872 391 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 MMP12P39900 470 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 NBL1P41271 181 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 EIF3BP55884 814 aaKnown RBP13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 PRAMEP78395 509 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 SLC29A2Q14542 456 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 TMEM52BQ4KMG9 183 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 ALS2CLQ60I27 953 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 PDPK2PQ6A1A2 396 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 KIAA0930Q6ICG6 404 aaPredicted RBP13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 KIAA1324Q6UXG2 1013 aaKnown RBP13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 MAMSTRQ6ZN01 415 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 LYSMD3Q7Z3D4 306 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 CROCCP2Q86T23 111 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 LMNTD2Q8IXW0 634 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 PGBD3Q8N328 593 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 CBARPQ8N350 705 aaPredicted RBP13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 TTC30BQ8N4P2 665 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 CAMKK1Q8N5S9 505 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 TSTD1Q8NFU3 115 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 CALML6Q8TD86 181 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 CXorf40AQ8TE69 158 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 MRGPRX1Q96LB2 322 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 CYTH2Q99418 400 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 FUT8Q9BYC5 575 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 CDH19Q9H159 772 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 KDM4CQ9H3R0 1056 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 PPCSQ9HAB8 311 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 TREX1Q9NSU2 369 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 PKD2L2Q9NZM6 624 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 IL17CQ9P0M4 197 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 BCCIPQ9P287 314 aaKnown RBP eCLIP13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 ARL5AQ9Y689 179 aa13.22□□□□□ -0.29
NDUFB11-201ENST00000276062 A0A1W2PP55 124 aa13.21□□□□□ -0.29
NDUFB11-201ENST00000276062 AREL1O15033 823 aa13.21□□□□□ -0.29
NDUFB11-201ENST00000276062 CLDN7O95471 211 aa13.21□□□□□ -0.29
NDUFB11-201ENST00000276062 PRKCGP05129 697 aa13.21□□□□□ -0.29
NDUFB11-201ENST00000276062 IVLP07476 585 aa13.21□□□□□ -0.29
NDUFB11-201ENST00000276062 NUDT17P0C025 328 aa13.21□□□□□ -0.29
NDUFB11-201ENST00000276062 ELFN1P0C7U0 828 aa13.21□□□□□ -0.29
NDUFB11-201ENST00000276062 OXTRP30559 389 aa13.21□□□□□ -0.29
NDUFB11-201ENST00000276062 DRD3P35462 400 aa13.21□□□□□ -0.29
NDUFB11-201ENST00000276062 CCR3P51677 355 aa13.21□□□□□ -0.29
NDUFB11-201ENST00000276062 ZNF140P52738 457 aaPredicted RBP13.21□□□□□ -0.29
NDUFB11-201ENST00000276062 NUBP1P53384 320 aa13.21□□□□□ -0.29
NDUFB11-201ENST00000276062 GPX6P59796 221 aa13.21□□□□□ -0.29
NDUFB11-201ENST00000276062 ACVR1Q04771 509 aa13.21□□□□□ -0.29
NDUFB11-201ENST00000276062 MGAT5Q09328 741 aa13.21□□□□□ -0.29
NDUFB11-201ENST00000276062 IFFO1Q0D2I5 559 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms