RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 MRPS23Q9Y3D9 190 aaKnown RBP14.36□□□□□ -0.11
TMEM47-201ENST00000275954 MT-ND1P03886 318 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 PCNAP12004 261 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 LPOP22079 712 aaPredicted RBP14.36□□□□□ -0.11
TMEM47-201ENST00000275954 FASP25445 335 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 TRAF2Q12933 501 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 TRNP1Q6NT89 227 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 C16orf87Q6PH81 154 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 STK32CQ86UX6 486 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 TREML1Q86YW5 311 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 LRRC49Q8IUZ0 686 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 SMG8Q8ND04 991 aaKnown RBP14.36□□□□□ -0.11
TMEM47-201ENST00000275954 FLCNQ8NFG4 579 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 OR13C4Q8NGS5 318 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 DENND1AQ8TEH3 1009 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 TCF25Q9BQ70 676 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 MRPL9Q9BYD2 267 aaKnown RBP14.36□□□□□ -0.11
TMEM47-201ENST00000275954 GRIP2Q9C0E4 1043 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 VPS45Q9NRW7 570 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 PCDHB8Q9UN66 801 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 KCTD3Q9Y597 815 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 AZIN1O14977 448 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 HNRNPDQ14103 355 aaKnown RBP14.36□□□□□ -0.11
TMEM47-201ENST00000275954 TIGD2Q4W5G0 525 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 MAMDC4Q6UXC1 1216 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 AGMOQ6ZNB7 445 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 SPPL2BQ8TCT7 592 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 NTAN1Q96AB6 310 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 LINGO1Q96FE5 620 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 ARL15Q9NXU5 204 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 GNEQ9Y223 722 aaKnown RBP14.36□□□□□ -0.11
TMEM47-201ENST00000275954 RAD54BQ9Y620 910 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 A0A0U1RQF3 1178 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 E7ESA3 106 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 RAD51BO15315 384 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 GPR32O75388 356 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 CNTN5O94779 1100 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 TMCC1O94876 653 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 DLDP09622 509 aaKnown RBP14.36□□□□□ -0.11
TMEM47-201ENST00000275954 TACR2P21452 398 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 CORO1AP31146 461 aaKnown RBP14.36□□□□□ -0.11
TMEM47-201ENST00000275954 WASP42768 502 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 GSSP48637 474 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 CPSF6Q16630 551 aaKnown RBP eCLIP14.36□□□□□ -0.11
TMEM47-201ENST00000275954 C12orf76Q8N812 135 aaPredicted RBP14.36□□□□□ -0.11
TMEM47-201ENST00000275954 GFM2Q969S9 779 aaKnown RBP14.36□□□□□ -0.11
TMEM47-201ENST00000275954 GPR21Q99679 349 aa14.36□□□□□ -0.11
TMEM47-201ENST00000275954 FAM124BQ9H5Z6 455 aaPredicted RBP14.36□□□□□ -0.11
TMEM47-201ENST00000275954 PTGESO14684 152 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 SIX3O95343 332 aaPredicted RBP14.35□□□□□ -0.11
TMEM47-201ENST00000275954 STAU1O95793 577 aaKnown RBP14.35□□□□□ -0.11
TMEM47-201ENST00000275954 ALDOAP04075 364 aaKnown RBP14.35□□□□□ -0.11
TMEM47-201ENST00000275954 FGF1P05230 155 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 FAM58BPP0C7Q3 252 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 KCNQ1P51787 676 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 RBM20Q5T481 1227 aaKnown RBP14.35□□□□□ -0.11
TMEM47-201ENST00000275954 CCDC81Q6ZN84 652 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 C14orf80Q86SX3 495 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 CLYBLQ8N0X4 340 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 MED8Q96G25 268 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 BCORQ6W2J9 1755 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 ITGB1P05556 798 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 ATP5BP06576 529 aaKnown RBP14.35□□□□□ -0.11
TMEM47-201ENST00000275954 HLA-DPA1P20036 260 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 PSEN1P49768 467 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 NEK3P51956 506 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 FPGSQ05932 587 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 STARD3Q14849 445 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 WLSQ5T9L3 541 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 RNF220Q5VTB9 566 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 FBXL22Q6P050 247 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 FBXW8Q8N3Y1 598 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 IRGQQ8WZA9 623 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 FCRL3Q96P31 734 aaPredicted RBP14.35□□□□□ -0.11
TMEM47-201ENST00000275954 C2orf49Q9BVC5 232 aaPredicted RBP14.35□□□□□ -0.11
TMEM47-201ENST00000275954 LIMD1Q9UGP4 676 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 SLC13A4Q9UKG4 626 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 ARL5AQ9Y689 179 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 STX16-NPEPL1H3BU86 382 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 UBXN8O00124 270 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 KPNA3O00505 521 aaPredicted RBP14.35□□□□□ -0.11
TMEM47-201ENST00000275954 LZTS3O60299 673 aaPredicted RBP14.35□□□□□ -0.11
TMEM47-201ENST00000275954 ACVRL1P37023 503 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 NRG1Q02297 640 aaPredicted RBP14.35□□□□□ -0.11
TMEM47-201ENST00000275954 TSTD2Q5T7W7 516 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 PPP2R2DQ66LE6 453 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 ZBTB46Q86UZ6 589 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 ZNF555Q8NEP9 628 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 DCUN1D5Q9BTE7 237 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 MCOLN1Q9GZU1 580 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 ZDHHC6Q9H6R6 413 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 CCSER2Q9H7U1 834 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 POLG2Q9UHN1 485 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 CASP8AP2Q9UKL3 1982 aa14.35□□□□□ -0.11
TMEM47-201ENST00000275954 PAPPAQ13219 1627 aa14.34□□□□□ -0.11
TMEM47-201ENST00000275954 AHCTF1Q8WYP5 2266 aa14.34□□□□□ -0.11
TMEM47-201ENST00000275954 ZSCAN9O15535 394 aaPredicted RBP14.34□□□□□ -0.11
TMEM47-201ENST00000275954 PFKMP08237 780 aa14.34□□□□□ -0.11
TMEM47-201ENST00000275954 PEX2P28328 305 aa14.34□□□□□ -0.11
TMEM47-201ENST00000275954 SOAT1P35610 550 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms