RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 ALPIP09923 528 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 ERCC2P18074 760 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 ITGB6P18564 788 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 CR2P20023 1033 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 TNFAIP3P21580 790 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 LHCGRP22888 699 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 IL1R2P27930 398 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 CSNK1DP48730 415 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 SUOXP51687 545 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 NDST2P52849 883 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 AIF1P55008 147 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 INHBCP55103 352 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 MAZP56270 477 aaKnown RBP8.98□□□□□ -0.97
TPM3-201ENST00000271850 TPI1P60174 286 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 RAD51Q06609 339 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 DPYSQ14117 519 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 C16orf72Q14CZ0 275 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 CNGA3Q16281 694 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 ACAD10Q6JQN1 1059 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 BRAT1Q6PJG6 821 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 ZNF574Q6ZN55 896 aaPredicted RBP8.98□□□□□ -0.97
TPM3-201ENST00000271850 CCDC81Q6ZN84 652 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 RFLNAQ6ZTI6 216 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 RFX8Q6ZV50 586 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 DPPA4Q7L190 304 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 CCNJLQ8IV13 435 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 FBXO39Q8N4B4 442 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 ARL14Q8N4G2 192 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 Q8N9G6 341 aaPredicted RBP8.98□□□□□ -0.97
TPM3-201ENST00000271850 OR56A4Q8NGH8 313 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 WDR48Q8TAF3 677 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 MED8Q96G25 268 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 COQ10AQ96MF6 247 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 ZNF641Q96N77 438 aaPredicted RBP8.98□□□□□ -0.97
TPM3-201ENST00000271850 SMIM14Q96QK8 99 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 GFM1Q96RP9 751 aaKnown RBP8.98□□□□□ -0.97
TPM3-201ENST00000271850 TUBGCP5Q96RT8 1024 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 CCNL2Q96S94 520 aaPredicted RBP8.98□□□□□ -0.97
TPM3-201ENST00000271850 NCAPGQ9BPX3 1015 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 C1QTNF7Q9BXJ2 289 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 SEMA6CQ9H3T2 930 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 CATSPERBQ9H7T0 1116 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 SPATS2LQ9NUQ6 558 aaKnown RBP8.98□□□□□ -0.97
TPM3-201ENST00000271850 B4GALT6Q9UBX8 382 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 PISDQ9UG56 409 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 PCSK1NQ9UHG2 260 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 LOXL2Q9Y4K0 774 aa8.98□□□□□ -0.97
TPM3-201ENST00000271850 PTPN13Q12923 2485 aa8.97□□□□□ -0.97
TPM3-201ENST00000271850 CFAP69A5D8W1 941 aa8.97□□□□□ -0.97
TPM3-201ENST00000271850 TMEM191CA6NGB0 347 aa8.97□□□□□ -0.97
TPM3-201ENST00000271850 TMEM110-MUSTN1A8MSY1 372 aa8.97□□□□□ -0.97
TPM3-201ENST00000271850 TMCO5BA8MYB1 307 aa8.97□□□□□ -0.97
TPM3-201ENST00000271850 B4DGG1 531 aa8.97□□□□□ -0.97
TPM3-201ENST00000271850 EEF2KO00418 725 aaKnown RBP8.97□□□□□ -0.97
TPM3-201ENST00000271850 HTRA2O43464 458 aaPredicted RBP8.97□□□□□ -0.97
TPM3-201ENST00000271850 LRCH4O75427 683 aa8.97□□□□□ -0.97
TPM3-201ENST00000271850 CEACAM5P06731 702 aa8.97□□□□□ -0.97
TPM3-201ENST00000271850 HOXC4P09017 264 aaPredicted RBP8.97□□□□□ -0.97
TPM3-201ENST00000271850 CTSEP14091 401 aa8.97□□□□□ -0.97
TPM3-201ENST00000271850 MIPP30301 263 aa8.97□□□□□ -0.97
TPM3-201ENST00000271850 BLKP51451 505 aa8.97□□□□□ -0.97
TPM3-201ENST00000271850 NFKB2Q00653 900 aa8.97□□□□□ -0.97
TPM3-201ENST00000271850 SLC10A7Q0GE19 358 aa8.97□□□□□ -0.97
TPM3-201ENST00000271850 C14orf28Q4W4Y0 310 aa8.97□□□□□ -0.97
TPM3-201ENST00000271850 FKBP15Q5T1M5 1219 aa8.97□□□□□ -0.97
TPM3-201ENST00000271850 SPECC1LQ69YQ0 1117 aa8.97□□□□□ -0.97
TPM3-201ENST00000271850 TXNRD3NBQ6F5E7 133 aa8.97□□□□□ -0.97
TPM3-201ENST00000271850 ZNF571Q7Z3V5 609 aaPredicted RBP8.97□□□□□ -0.97
TPM3-201ENST00000271850 VASH2Q86V25 355 aa8.97□□□□□ -0.97
TPM3-201ENST00000271850 ZFAND4Q86XD8 727 aa8.97□□□□□ -0.97
TPM3-201ENST00000271850 GKN2Q86XP6 184 aa8.97□□□□□ -0.97
TPM3-201ENST00000271850 DTX1Q86Y01 620 aa8.97□□□□□ -0.97
TPM3-201ENST00000271850 NEK11Q8NG66 645 aa8.97□□□□□ -0.97
TPM3-201ENST00000271850 PATE1Q8WXA2 126 aa8.97□□□□□ -0.97
TPM3-201ENST00000271850 GLMNQ92990 594 aa8.97□□□□□ -0.97
TPM3-201ENST00000271850 NUDT22Q9BRQ3 303 aa8.97□□□□□ -0.97
TPM3-201ENST00000271850 DHX35Q9H5Z1 703 aaKnown RBP8.97□□□□□ -0.97
TPM3-201ENST00000271850 SEPT11Q9NVA2 429 aaKnown RBP8.97□□□□□ -0.97
TPM3-201ENST00000271850 CWC15Q9P013 229 aaKnown RBP8.97□□□□□ -0.97
TPM3-201ENST00000271850 DOLKQ9UPQ8 538 aa8.97□□□□□ -0.97
TPM3-201ENST00000271850 PLEKHM1Q9Y4G2 1056 aa8.97□□□□□ -0.97
TPM3-201ENST00000271850 PCYT1BQ9Y5K3 369 aaPredicted RBP8.97□□□□□ -0.97
TPM3-201ENST00000271850 PRSS38A1L453 326 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 DFFAO00273 331 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 DDX3XO00571 662 aaKnown RBP eCLIP8.96□□□□□ -0.98
TPM3-201ENST00000271850 TNFRSF10CO14798 259 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 NVLO15381 856 aaKnown RBP8.96□□□□□ -0.98
TPM3-201ENST00000271850 PALMO75781 387 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 TNFP01375 233 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 FGF1P05230 155 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 ELFN1P0C7U0 828 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 CCL4P13236 92 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 GLB1P16278 677 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 XPAP23025 273 aaPredicted RBP8.96□□□□□ -0.98
TPM3-201ENST00000271850 PSMA2P25787 234 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 AK4P27144 223 aaPredicted RBP8.96□□□□□ -0.98
TPM3-201ENST00000271850 HTR1BP28222 390 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 CSF2RBP32927 897 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 HTR7P34969 479 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 OR1D5P58170 312 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms