RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 LRRC1Q9BTT6 524 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 SLC28A3Q9HAS3 691 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 RNPEPL1Q9HAU8 725 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 PXMP2Q9NR77 195 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 DNAJC5BQ9UF47 199 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 ENDOD1O94919 500 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 COX4I1P13073 169 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 HDCP19113 662 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 CARTPTQ16568 116 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 ZNF470Q6ECI4 717 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 DOK6Q6PKX4 331 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 TPGS1Q6ZTW0 290 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 STOX1Q6ZVD7 989 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 FBXO33Q7Z6M2 555 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 COLGALT1Q8NBJ5 622 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 CNDP2Q96KP4 475 aaKnown RBP13.28□□□□□ -0.28
PRDM16-201ENST00000270722 RIPOR3Q96MK2 946 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 PLAGL2Q9UPG8 496 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 PROSCO94903 275 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 NR2F1P10589 423 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 RXFP2Q8WXD0 754 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 MAGEE1Q9HCI5 957 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 SAR1AQ9NR31 198 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 ZNHIT2Q9UHR6 403 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 C3orf18Q9UK00 162 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 SPHKAPQ2M3C7 1700 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 IL1BP01584 269 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 ALDH3A2P51648 485 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 SLC4A11Q8NBS3 891 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 KIAA1683Q9H0B3 1180 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 ZDHHC6Q9H6R6 413 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 CLIC5Q9NZA1 410 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 BTN3A1O00481 513 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 GPALPP1Q8IXQ4 340 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 ELMOD2Q8IZ81 293 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 DAW1Q8N136 415 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 LIMD1Q9UGP4 676 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 CDH9Q9ULB4 789 aa13.28□□□□□ -0.28
PRDM16-201ENST00000270722 KNTC1P50748 2209 aa13.27□□□□□ -0.28
PRDM16-201ENST00000270722 PGRMC2O15173 223 aa13.27□□□□□ -0.28
PRDM16-201ENST00000270722 RSL1D1O76021 490 aaKnown RBP13.27□□□□□ -0.28
PRDM16-201ENST00000270722 IFNA6P05013 189 aa13.27□□□□□ -0.28
PRDM16-201ENST00000270722 INSRRP14616 1297 aa13.27□□□□□ -0.28
PRDM16-201ENST00000270722 NOS2P35228 1153 aa13.27□□□□□ -0.28
PRDM16-201ENST00000270722 CDH11P55287 796 aa13.27□□□□□ -0.28
PRDM16-201ENST00000270722 SAMD7Q7Z3H4 446 aa13.27□□□□□ -0.28
PRDM16-201ENST00000270722 RUVBL1Q9Y265 456 aaKnown RBP13.27□□□□□ -0.28
PRDM16-201ENST00000270722 N6AMT1Q9Y5N5 214 aa13.27□□□□□ -0.28
PRDM16-201ENST00000270722 CDC42BPAQ5VT25 1732 aa13.27□□□□□ -0.28
PRDM16-201ENST00000270722 GJA1P17302 382 aa13.27□□□□□ -0.28
PRDM16-201ENST00000270722 TMEM120AQ9BXJ8 343 aa13.27□□□□□ -0.28
PRDM16-201ENST00000270722 CCDC86Q9H6F5 360 aaKnown RBP13.27□□□□□ -0.28
PRDM16-201ENST00000270722 MED14O60244 1454 aa13.27□□□□□ -0.28
PRDM16-201ENST00000270722 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.27□□□□□ -0.28
PRDM16-201ENST00000270722 KNL1Q8NG31 2342 aa13.27□□□□□ -0.28
PRDM16-201ENST00000270722 PROSER1Q86XN7 944 aa13.27□□□□□ -0.28
PRDM16-201ENST00000270722 HGH1Q9BTY7 390 aa13.27□□□□□ -0.28
PRDM16-201ENST00000270722 MCCC2Q9HCC0 563 aa13.27□□□□□ -0.28
PRDM16-201ENST00000270722 DMGDHQ9UI17 866 aaKnown RBP13.27□□□□□ -0.28
PRDM16-201ENST00000270722 USP42Q9H9J4 1324 aaKnown RBP13.27□□□□□ -0.28
PRDM16-201ENST00000270722 I3L521 148 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 OIP5O43482 229 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 TLL1O43897 1013 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 ORC5O43913 435 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 ULK1O75385 1050 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 CDH8P55286 799 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 FASTKQ14296 549 aaKnown RBP13.27□□□□□ -0.29
PRDM16-201ENST00000270722 DLG2Q15700 870 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 SNAP47Q5SQN1 464 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 FSTL5Q8N475 847 aaPredicted RBP13.27□□□□□ -0.29
PRDM16-201ENST00000270722 OR2B2Q9GZK3 357 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 AASSQ9UDR5 926 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 PCDHGC3Q9UN70 934 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 CCNYL3P0C7X3 344 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 MAGEA3P43357 314 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 UGT2B15P54855 530 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 SCN1BQ07699 218 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 FIGNQ5HY92 759 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 PCID2Q5JVF3 399 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 TAPT1Q6NXT6 567 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 FRMD6Q96NE9 622 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 DDX3XO00571 662 aaKnown RBP eCLIP13.27□□□□□ -0.293e-7■■■■□ 19.6
PRDM16-201ENST00000270722 ZNF208O43345 1280 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 CAMTA2O94983 1202 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 CYP4F8P98187 520 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 RBM44Q6ZP01 1051 aaKnown RBP13.27□□□□□ -0.29
PRDM16-201ENST00000270722 INO80EQ8NBZ0 244 aaPredicted RBP13.27□□□□□ -0.29
PRDM16-201ENST00000270722 ZNF563Q8TA94 476 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 SHDQ96IW2 340 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 SLC39A1Q9NY26 324 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 FAM153BP0C7A2 387 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 SP3Q02447 781 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 PPIGQ13427 754 aaKnown RBP eCLIP13.27□□□□□ -0.29
PRDM16-201ENST00000270722 HES5Q5TA89 166 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 CHST15Q7LFX5 561 aaPredicted RBP13.27□□□□□ -0.29
PRDM16-201ENST00000270722 TAMM41Q96BW9 452 aa13.27□□□□□ -0.29
PRDM16-201ENST00000270722 CAPN14A8MX76 684 aa13.26□□□□□ -0.29
PRDM16-201ENST00000270722 ZNF549Q6P9A3 640 aa13.26□□□□□ -0.29
PRDM16-201ENST00000270722 PAFAH2Q99487 392 aa13.26□□□□□ -0.29
PRDM16-201ENST00000270722 CYP4F12Q9HCS2 524 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms