RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 CNSTQ6PJW8 725 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 KIAA0408Q6ZU52 694 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 IGDCC3Q8IVU1 814 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 FLCNQ8NFG4 579 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 PIWIL2Q8TC59 973 aaKnown RBP14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 TLCD1Q96CP7 247 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 CEP295NLQ96MC4 621 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 FAM83DQ9H4H8 585 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 VPS51Q9UID3 782 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 TBC1D3DA0A087WVF3 549 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 TBC1D3IA0A087WXS9 549 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 TBC1D3EA0A087X179 549 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 TBC1D3KA0A087X1G2 549 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 TBC1D3FA6NER0 549 aaPredicted RBP14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 TBC1D3LB9A6J9 549 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 MAFKO60675 156 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 RNASEH2AO75792 299 aaKnown RBP14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 ALPIP09923 528 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 TBC1D3HP0C7X1 549 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 SOX11P35716 441 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 THOP1P52888 689 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 COPAP53621 1224 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 DNAL1Q4LDG9 190 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 TBC1D3GQ6DHY5 549 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 TBC1D3CQ6IPX1 549 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 PDE12Q6L8Q7 609 aaKnown RBP14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 CAND1Q86VP6 1230 aaKnown RBP14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 TBC1D3Q8IZP1 549 aaPredicted RBP14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 AGGF1Q8N302 714 aaeCLIP14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 PCYOX1LQ8NBM8 494 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 OR56A4Q8NGH8 313 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 SLC26A7Q8TE54 656 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 NXNL1Q96CM4 212 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 SUV39H2Q9H5I1 410 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 SNX3O60493 162 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 KCNK10P57789 538 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 PLIN5Q00G26 463 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 PLEKHG6Q3KR16 790 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 PHOSPHO2Q8TCD6 241 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 MRPL40Q9NQ50 206 aaKnown RBP14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 MRGBPQ9NV56 204 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 DYRK1BQ9Y463 629 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 TCRBV5S1A1TA0A578 114 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 CRHR1P34998 444 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 IL1RL1Q01638 556 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 UBE3AQ05086 875 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 TAF1AQ15573 450 aaPredicted RBP14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 MRPL43Q8N983 215 aaKnown RBP14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 SEC14L1Q92503 715 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 OXNAD1Q96HP4 312 aaPredicted RBP14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 FEM1AQ9BSK4 669 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 TRMT61BQ9BVS5 477 aaKnown RBP14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 MTMR10Q9NXD2 777 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 SLC2A6Q9UGQ3 507 aa14.48□□□□□ -0.09
PDLIM2-201ENST00000265810 CCDC162PA2VCL2 907 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 TRIM43BA6NCK2 446 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 CATP04040 527 aaKnown RBP14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 TCN1P20061 433 aaPredicted RBP14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 SLC1A2P43004 574 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 ATXN3P54252 364 aaPredicted RBP14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 NR6A1Q15406 480 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 EML3Q32P44 896 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 C2orf27AQ580R0 203 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 MILR1Q7Z6M3 343 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 TRIM43Q96BQ3 446 aaPredicted RBP14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 SYNDIG1Q9H7V2 258 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 OPTCQ9UBM4 332 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 COL11A1P12107 1806 aaPredicted RBP14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 CACNG1Q06432 222 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 FOXR1Q6PIV2 292 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 CERS6Q6ZMG9 384 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 TRPC4APQ8TEL6 797 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 WFIKKN2Q8TEU8 576 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 AP2M1Q96CW1 435 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 GPR21Q99679 349 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 KDM4CQ9H3R0 1056 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 POLR3BQ9NW08 1133 aaPredicted RBP14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 ARMCX1Q9P291 453 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 MAFFQ9ULX9 164 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 FCHO1O14526 889 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 IVDP26440 423 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 NUDT2P50583 147 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 RPL14P50914 215 aaKnown RBP14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 TAS2R39P59534 338 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 GRM2Q14416 872 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 ZNF460Q14592 562 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 PDGFRLQ15198 375 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 ARSIQ5FYB1 569 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 CATSPER2Q96P56 530 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 ACSS2Q9NR19 701 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 ANGPTL2Q9UKU9 493 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 NME7Q9Y5B8 376 aa14.47□□□□□ -0.09
PDLIM2-201ENST00000265810 UBDO15205 165 aa14.46□□□□□ -0.09
PDLIM2-201ENST00000265810 ASLP04424 464 aa14.46□□□□□ -0.09
PDLIM2-201ENST00000265810 ANXA5P08758 320 aa14.46□□□□□ -0.09
PDLIM2-201ENST00000265810 HNRNPLP14866 589 aaKnown RBP eCLIP14.46□□□□□ -0.09
PDLIM2-201ENST00000265810 CDH13P55290 713 aa14.46□□□□□ -0.09
PDLIM2-201ENST00000265810 NAA25Q14CX7 972 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms