RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 SNX12Q9UMY4 172 aa7.26□□□□□ -1.25
DEPDC1B-201ENST00000265036 RP1P56715 2156 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 A0A1W2PR77 199 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 DCDC2BA2VCK2 349 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 ANKRD66B4E2M5 251 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 C1SP09871 688 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 CA4P22748 312 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 HOXD12P35452 270 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 INPP5AQ14642 412 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 PTPRCAPQ14761 206 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 LRRC14Q15048 493 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 TEAD4Q15561 434 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 RSPO4Q2I0M5 234 aaPredicted RBP7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 SIRPB2Q5JXA9 342 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 STPG1Q5TH74 334 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 TTC27Q6P3X3 843 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 KDELC1Q6UW63 502 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 Q6ZSR6 202 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 GSTA5Q7RTV2 222 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 PRELID2Q8N945 189 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 TP53I13Q8NBR0 393 aaPredicted RBP7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 CEP76Q8TAP6 659 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 EID2BQ96D98 161 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 NUS1Q96E22 293 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 SCRN2Q96FV2 425 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 BMFQ96LC9 184 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 LENG8Q96PV6 779 aaPredicted RBP7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 MCCC1Q96RQ3 725 aaPredicted RBP7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 FERMT1Q9BQL6 677 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 BPIFA1Q9NP55 256 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 ARFGAP3Q9NP61 516 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 CDV3Q9UKY7 258 aaKnown RBP7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 PNMA8BQ9ULN7 279 aaPredicted RBP7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 TTC7AQ9ULT0 858 aaPredicted RBP7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 LRP4O75096 1905 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 TLR4O00206 839 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 PGRMC1O00264 195 aaKnown RBP7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 CCL22O00626 93 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 FPGTO14772 594 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 LRP3O75074 770 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 ATXN1LP0C7T5 689 aaKnown RBP7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 MSNP26038 577 aaKnown RBP7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 TNNT3P45378 269 aaPredicted RBP7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 LMNB2Q03252 620 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 TMEM52BQ4KMG9 183 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 RALGPS1Q5JS13 557 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 ITPRIPL1Q6GPH6 555 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 RAET1GQ6H3X3 334 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 NEK5Q6P3R8 708 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 DOK6Q6PKX4 331 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 SYT10Q6XYQ8 523 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 RD3Q7Z3Z2 195 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 RBFAQ8N0V3 343 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 PDCD7Q8N8D1 485 aaKnown RBP7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 CCDC89Q8N998 374 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 CENPTQ96BT3 561 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 KLHDC7BQ96G42 594 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 CAMK1GQ96NX5 476 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 FCRL5Q96RD9 977 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 AGAP2Q99490 1192 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 VAT1Q99536 393 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 NAPGQ99747 312 aaPredicted RBP7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 ADGRE3Q9BY15 652 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 TCEAL2Q9H3H9 227 aaPredicted RBP7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 GDF3Q9NR23 364 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 DNAJC28Q9NX36 388 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 DMTF1Q9Y222 760 aa7.25□□□□□ -1.25
DEPDC1B-201ENST00000265036 ACACBO00763 2458 aa7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 ZFC3H1O60293 1989 aaKnown RBP7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 A6NNZ2 444 aa7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 INPP4BO15327 924 aa7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 OPHN1O60890 802 aa7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 NDST3O95803 873 aa7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 CYP2A6P11509 494 aaPredicted RBP7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 GRIA1P42261 906 aa7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 CTSKP43235 329 aa7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 THOP1P52888 689 aa7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 BASP1P80723 227 aaKnown RBP7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 MRPS25P82663 173 aaKnown RBP7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 PTSQ03393 145 aa7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 BNIP3Q12983 259 aa7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 SMAD1Q15797 465 aaKnown RBP7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 NAT14Q8WUY8 206 aa7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 PDXPQ96GD0 296 aa7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 LGR4Q9BXB1 951 aa7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 GPR63Q9BZJ6 419 aa7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 DDX47Q9H0S4 455 aaKnown RBP7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 MRPL40Q9NQ50 206 aaKnown RBP7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 MOSPD1Q9UJG1 213 aa7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 TRHDEQ9UKU6 1024 aa7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 BTBD3Q9Y2F9 522 aa7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 ZNF711Q9Y462 761 aa7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 CTAGE9A4FU28 777 aa7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 PRR5-ARHGAP8B1AHC4 643 aa7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 VILLO15195 856 aa7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 FFAR2O15552 330 aa7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 SYPP08247 313 aa7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 TPH1P17752 444 aa7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 NXPH1P58417 271 aa7.24□□□□□ -1.25
DEPDC1B-201ENST00000265036 SLC1A5Q15758 541 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms