RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 GPR152Q8TDT2 470 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 HDAC10Q969S8 669 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 ZNF354BQ96LW1 612 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 RASSF1Q9NS23 344 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 CORO1CQ9ULV4 474 aaPredicted RBP18.01■□□□□ 0.47
COL5A3-201ENST00000264828 AMHP03971 560 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 AKR1A1P14550 325 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 AQP1P29972 269 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 PIGZQ86VD9 579 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 BHLHE41Q9C0J9 482 aaPredicted RBP18.01■□□□□ 0.47
COL5A3-201ENST00000264828 ING3Q9NXR8 418 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 A0A0J9YYE9 177 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 XYLBO75191 536 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 MC4RP32245 332 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 FAM81AQ8TBF8 368 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 ACMSDQ8TDX5 336 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 RTKNQ9BST9 563 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 ATP13A3Q9H7F0 1226 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 DPP7Q9UHL4 492 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 SERPINA1P01009 418 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 MTHFRP42898 656 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 CDK9P50750 372 aaKnown RBP18■□□□□ 0.47
COL5A3-201ENST00000264828 TIGD2Q4W5G0 525 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 ACSS3Q9H6R3 686 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 STX16-NPEPL1H3BU86 382 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 GTPBP1O00178 669 aaKnown RBP18■□□□□ 0.47
COL5A3-201ENST00000264828 STX16O14662 325 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 UBA1P22314 1058 aaKnown RBP18■□□□□ 0.47
COL5A3-201ENST00000264828 SMIM11AP58511 58 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 PRKG2Q13237 762 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 LRRC38Q5VT99 294 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 PIWIL4Q7Z3Z4 852 aaKnown RBP18■□□□□ 0.47
COL5A3-201ENST00000264828 CUZD1Q86UP6 607 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 TSPAN9O75954 239 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 SEMA3DO95025 777 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 CAPGP40121 348 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 IL18Q14116 193 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 PLA2G4EQ3MJ16 856 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 TXNDC11Q6PKC3 985 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 ZNF554Q86TJ5 538 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 OR4L1Q8NH43 312 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 CXorf40BQ96DE9 158 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 DSN1Q9H410 356 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 PRDM16Q9HAZ2 1276 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 SLC6A2P23975 617 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 TGFBR2P37173 567 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 PRR23CQ6ZRP0 262 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 UNC93AQ86WB7 457 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 RALGPS2Q86X27 583 aaPredicted RBP18■□□□□ 0.47
COL5A3-201ENST00000264828 IQCF2Q8IXL9 164 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18■□□□□ 0.47
COL5A3-201ENST00000264828 TRPV3Q8NET8 790 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 MRPL9Q9BYD2 267 aaKnown RBP18■□□□□ 0.47
COL5A3-201ENST00000264828 NKIRAS2Q9NYR9 191 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 FAM198AQ9UFP1 575 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 BTNL10A8MVZ5 291 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 NOS1APO75052 506 aaPredicted RBP18■□□□□ 0.47
COL5A3-201ENST00000264828 TSHRP16473 764 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 LRRC55Q6ZSA7 311 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 ADGRG2Q8IZP9 1017 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 ZNF670Q9BS34 389 aa18■□□□□ 0.47
COL5A3-201ENST00000264828 PTPRAP18433 802 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 MTTPP55157 894 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 KCNA10Q16322 511 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 HECTD3Q5T447 861 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 CERCAMQ5T4B2 595 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 ARL10Q8N8L6 244 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 PJA1Q8NG27 643 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 MCFD2Q8NI22 146 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 FCRL4Q96PJ5 515 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 EXO5Q9H790 373 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 S100A14Q9HCY8 104 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 PRPF19Q9UMS4 504 aaKnown RBP17.99■□□□□ 0.47
COL5A3-201ENST00000264828 AREL1O15033 823 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 DDX3YO15523 660 aaKnown RBP17.99■□□□□ 0.47
COL5A3-201ENST00000264828 ZW10O43264 779 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 EDF1O60869 148 aaKnown RBP17.99■□□□□ 0.47
COL5A3-201ENST00000264828 PTPN20Q4JDL3 420 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 RNF220Q5VTB9 566 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 PARGQ86W56 976 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 RGS20O76081 388 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 FTH1P02794 183 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 RIPK1Q13546 671 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 AAGABQ6PD74 315 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 CITED4Q96RK1 184 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 CIB1Q99828 191 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 WDR12Q9GZL7 423 aaKnown RBP17.99■□□□□ 0.47
COL5A3-201ENST00000264828 TRNAU1APQ9NX07 287 aaKnown RBP17.99■□□□□ 0.47
COL5A3-201ENST00000264828 KLRC4O43908 158 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 SEPHS1P49903 392 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 PHF13Q86YI8 300 aaPredicted RBP17.99■□□□□ 0.47
COL5A3-201ENST00000264828 OR5B17Q8NGF7 314 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 RERGQ96A58 199 aaPredicted RBP17.99■□□□□ 0.47
COL5A3-201ENST00000264828 FAM84AQ96KN4 292 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 WDR18Q9BV38 432 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 KCND1Q9NSA2 647 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 MAPRE3Q9UPY8 281 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 RBM7Q9Y580 266 aaKnown RBP17.99■□□□□ 0.47
COL5A3-201ENST00000264828 TRAV19A0A0A6YYK7 116 aa17.99■□□□□ 0.47
COL5A3-201ENST00000264828 GSAPA4D1B5 854 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms