RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 PANX3Q96QZ0 392 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 WDR12Q9GZL7 423 aaKnown RBP12.07□□□□□ -0.48
SMG6-201ENST00000263073 ASB7Q9H672 318 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 UCKL1Q9NWZ5 548 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 NRXN1Q9ULB1 1477 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 ZNF536O15090 1300 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 UGT1A9O60656 530 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 SERPINA1P01009 418 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 FTH1P02794 183 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 NPR3P17342 541 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 CDK9P50750 372 aaKnown RBP12.07□□□□□ -0.48
SMG6-201ENST00000263073 UGT2B15P54855 530 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 GTF2BQ00403 316 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 TGM3Q08188 693 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 FSCN1Q16658 493 aaKnown RBP12.07□□□□□ -0.48
SMG6-201ENST00000263073 C5orf22Q49AR2 442 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 PRAMEF19Q5SWL8 479 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 ZNF544Q6NX49 715 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 KCTD8Q6ZWB6 473 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 RASGEF1CQ8N431 466 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 REPS1Q96D71 796 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 FAM210AQ96ND0 272 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 UGT1A7Q9HAW7 530 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 UGT1A10Q9HAW8 530 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 UGT1A8Q9HAW9 530 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 ING3Q9NXR8 418 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 SPATA31D1Q6ZQQ2 1576 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 MSI1O43347 362 aaKnown RBP12.07□□□□□ -0.48
SMG6-201ENST00000263073 SHOX2O60902 331 aaPredicted RBP12.07□□□□□ -0.48
SMG6-201ENST00000263073 TRIM3O75382 744 aaPredicted RBP12.07□□□□□ -0.48
SMG6-201ENST00000263073 MLYCDO95822 493 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 RLN1P04808 185 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 PSMD4P55036 377 aaKnown RBP12.07□□□□□ -0.48
SMG6-201ENST00000263073 BIKQ13323 160 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 STYK1Q6J9G0 422 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 ZPBP2Q6X784 338 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 BBS12Q6ZW61 710 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 PHF13Q86YI8 300 aaPredicted RBP12.07□□□□□ -0.48
SMG6-201ENST00000263073 SLC4A11Q8NBS3 891 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 OR52L1Q8NGH7 329 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 POF1BQ8WVV4 589 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 KAT2AQ92830 837 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 TOP1MTQ969P6 601 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 MLPHQ9BV36 600 aaPredicted RBP12.07□□□□□ -0.48
SMG6-201ENST00000263073 FNDC11Q9BVV2 318 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 SPG21Q9NZD8 308 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 NKX1-2Q9UD57 310 aaPredicted RBP12.07□□□□□ -0.48
SMG6-201ENST00000263073 A0A1W2PRG6 482 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 UBE2QL1A1L167 161 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 TPST2O60704 377 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 RNASEH1O60930 286 aaKnown RBP12.07□□□□□ -0.48
SMG6-201ENST00000263073 ATP6V1G1O75348 118 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 CEBPGP53567 150 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 PRKG2Q13237 762 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 PLA2G4EQ3MJ16 856 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 GPR158Q5T848 1215 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 OR2T12Q8NG77 320 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 SLC44A1Q8WWI5 657 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 VPS4AQ9UN37 437 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 TNPO3Q9Y5L0 923 aaKnown RBP12.07□□□□□ -0.48
SMG6-201ENST00000263073 PTPRUQ92729 1446 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 BCKDKO14874 412 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 STX11O75558 287 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 C2P06681 752 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 CASP9P55211 416 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 TSC22D1Q15714 1073 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 KCNA10Q16322 511 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 GPR180Q86V85 440 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 LZTR1Q8N653 840 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 CCDC185Q8N715 623 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 CPT1BQ92523 772 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 FCRL4Q96PJ5 515 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 SLC4A9Q96Q91 983 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 P2RX7Q99572 595 aaKnown RBP12.07□□□□□ -0.48
SMG6-201ENST00000263073 ABCC13Q9NSE7 274 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 GNPTGQ9UJJ9 305 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 FBXO5Q9UKT4 447 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 RPTORQ8N122 1335 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 NTSP30990 170 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 CRHR1P34998 444 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 ACLYP53396 1101 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 MYBPC1Q00872 1141 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 CAPSQ13938 189 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 FNDC3BQ53EP0 1204 aaKnown RBP12.06□□□□□ -0.48
SMG6-201ENST00000263073 RHBDF2Q6PJF5 856 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 NKAPQ8N5F7 415 aaKnown RBP12.06□□□□□ -0.48
SMG6-201ENST00000263073 AGBL3Q8NEM8 1001 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 OR8H1Q8NGG4 311 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 OR2T34Q8NGX1 318 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 OR2T3Q8NH03 318 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 VAT1Q99536 393 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 EBF4Q9BQW3 602 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 GSDMCQ9BYG8 508 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 COQ10BQ9H8M1 238 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 EQTNQ9NQ60 294 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 PHF11Q9UIL8 331 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 MAP2P11137 1827 aaKnown RBP12.06□□□□□ -0.48
SMG6-201ENST00000263073 A0A1W2PQ67 120 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 KPNA5O15131 536 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 SLC28A2O43868 658 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms