RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 SMG7Q92540 1137 aaKnown RBP12.88□□□□□ -0.35
TTC39A-202ENST00000262676 ASB2Q96Q27 587 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 ZCCHC2Q9C0B9 1178 aaKnown RBP12.88□□□□□ -0.35
TTC39A-202ENST00000262676 CST11Q9H112 138 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 LRMDAQ9H2I8 198 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 L2HGDHQ9H9P8 463 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 NUP50Q9UKX7 468 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 KIAA1257Q9ULG3 409 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 NCAM2O15394 837 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 ENTPD5O75356 428 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 LRATO95237 230 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 ATP5BP06576 529 aaKnown RBP12.88□□□□□ -0.35
TTC39A-202ENST00000262676 THRBP10828 461 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 PSMD5Q16401 504 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 HDAC7Q8WUI4 952 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 SENP8Q96LD8 212 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 DMRTB1Q96MA1 342 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 MAP3K14Q99558 947 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 ZNF518BQ9C0D4 1074 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 ATXN10Q9UBB4 475 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 GAKO14976 1311 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 GSAPA4D1B5 854 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 ZSCAN5BA6NJL1 495 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 TRIM38O00635 465 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 NRP2O60462 931 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 SELPP16109 830 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 KCNJ2P63252 427 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 SMU1Q2TAY7 513 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 SPDYCQ5MJ68 293 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 OR4A15Q8NGL6 344 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 PTCD3Q96EY7 689 aaKnown RBP12.88□□□□□ -0.35
TTC39A-202ENST00000262676 FTHL17Q9BXU8 183 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 EGFL7Q9UHF1 273 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 DNPEPQ9ULA0 475 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 AP3M1Q9Y2T2 418 aa12.88□□□□□ -0.35
TTC39A-202ENST00000262676 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.88□□□□□ -0.35
TTC39A-202ENST00000262676 CCNDBP1O95273 360 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 CYP2A6P11509 494 aaPredicted RBP12.87□□□□□ -0.35
TTC39A-202ENST00000262676 TLX1P31314 330 aaPredicted RBP12.87□□□□□ -0.35
TTC39A-202ENST00000262676 CDK7P50613 346 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 RPL38P63173 70 aaKnown RBP12.87□□□□□ -0.35
TTC39A-202ENST00000262676 WSCD1Q658N2 575 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 CLEC17AQ6ZS10 378 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 APTXQ7Z2E3 356 aaKnown RBP12.87□□□□□ -0.35
TTC39A-202ENST00000262676 ZNF410Q86VK4 478 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 SPERTQ8NA61 448 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 LRRN4CLQ8ND94 238 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 CLHC1Q8NHS4 586 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 RASSF5Q8WWW0 418 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 PANX3Q96QZ0 392 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.87□□□□□ -0.35
TTC39A-202ENST00000262676 SEMA6BQ9H3T3 888 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 PSMD9O00233 223 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 MC1RQ01726 317 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 FPGSQ05932 587 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 MAPKAPK3Q16644 382 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 TATDN2Q93075 761 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 FBXO44Q9H4M3 255 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 UCKL1Q9NWZ5 548 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 SYNPO2Q9UMS6 1093 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 AP4B1Q9Y6B7 739 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 SLC28A2O43868 658 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 KYAT3Q6YP21 454 aaKnown RBP12.87□□□□□ -0.35
TTC39A-202ENST00000262676 CHST4Q8NCG5 386 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 SLC2A14Q8TDB8 520 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 CEP295NLQ96MC4 621 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 FBXO6Q9NRD1 293 aaPredicted RBP12.87□□□□□ -0.35
TTC39A-202ENST00000262676 CAMTA1Q9Y6Y1 1673 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 A0A1W2PQ72 361 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 RGSL1A5PLK6 1076 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 KCNK1O00180 336 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 RGS10O43665 173 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 SGTAO43765 313 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 IL1BP01584 269 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 LINC00032P0C843 101 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 IFI30P13284 250 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 CDK9P50750 372 aaKnown RBP12.87□□□□□ -0.35
TTC39A-202ENST00000262676 DEFA5Q01523 94 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 BCL2L1Q07817 233 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.87□□□□□ -0.35
TTC39A-202ENST00000262676 FRMD7Q6ZUT3 714 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 CTU1Q7Z7A3 348 aaKnown RBP12.87□□□□□ -0.35
TTC39A-202ENST00000262676 TAS1R2Q8TE23 839 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 TSEN15Q8WW01 171 aaKnown RBP12.87□□□□□ -0.35
TTC39A-202ENST00000262676 SPATA5L1Q9BVQ7 753 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 LACRTQ9GZZ8 138 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 FDPSP14324 419 aaKnown RBP12.87□□□□□ -0.35
TTC39A-202ENST00000262676 DGKAP23743 735 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 OR1D2P34982 312 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 PLET1Q6UQ28 207 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 ATCAYQ86WG3 371 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 ZNF248Q8NDW4 579 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 PIK3C3Q8NEB9 887 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 QRFPRQ96P65 431 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 TCF25Q9BQ70 676 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 PRDM8Q9NQV8 689 aa12.87□□□□□ -0.35
TTC39A-202ENST00000262676 LEF1Q9UJU2 399 aaPredicted RBP12.87□□□□□ -0.35
TTC39A-202ENST00000262676 INSCQ1MX18 579 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 EHD1Q9H4M9 534 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 U3KQV3 271 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms