RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 HIPK1Q86Z02 1210 aa16.23■□□□□ 0.19
SREBF1-201ENST00000261646 B3GALNT2Q8NCR0 500 aa16.23■□□□□ 0.19
SREBF1-201ENST00000261646 PNPT1Q8TCS8 783 aaKnown RBP16.23■□□□□ 0.19
SREBF1-201ENST00000261646 ELOVL6Q9H5J4 265 aa16.23■□□□□ 0.19
SREBF1-201ENST00000261646 SLC38A7Q9NVC3 462 aa16.23■□□□□ 0.19
SREBF1-201ENST00000261646 STMN3Q9NZ72 180 aa16.23■□□□□ 0.19
SREBF1-201ENST00000261646 ADGRE2Q9UHX3 823 aa16.23■□□□□ 0.19
SREBF1-201ENST00000261646 CNTN6Q9UQ52 1028 aa16.23■□□□□ 0.19
SREBF1-201ENST00000261646 TBC1D30Q9Y2I9 924 aa16.23■□□□□ 0.19
SREBF1-201ENST00000261646 MYH1P12882 1939 aa16.23■□□□□ 0.19
SREBF1-201ENST00000261646 MYH4Q9Y623 1939 aa16.23■□□□□ 0.19
SREBF1-201ENST00000261646 CAPN14A8MX76 684 aa16.23■□□□□ 0.19
SREBF1-201ENST00000261646 H3BMM5 538 aa16.23■□□□□ 0.19
SREBF1-201ENST00000261646 ENDOD1O94919 500 aa16.23■□□□□ 0.19
SREBF1-201ENST00000261646 C10orf120Q5SQS8 335 aa16.23■□□□□ 0.19
SREBF1-201ENST00000261646 TMEM53Q6P2H8 277 aa16.23■□□□□ 0.19
SREBF1-201ENST00000261646 P2RY8Q86VZ1 359 aa16.23■□□□□ 0.19
SREBF1-201ENST00000261646 TWIST2Q8WVJ9 160 aa16.23■□□□□ 0.19
SREBF1-201ENST00000261646 SUCOQ9UBS9 1254 aaKnown RBP16.23■□□□□ 0.19
SREBF1-201ENST00000261646 MAGEL2Q9UJ55 1249 aa16.23■□□□□ 0.19
SREBF1-201ENST00000261646 NFASCO94856 1347 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 C10orf71Q711Q0 1435 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 ADM5C9JUS6 153 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 H3BRB1 525 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 RECQL4O94761 1208 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 PORP16435 677 aaPredicted RBP16.22■□□□□ 0.19
SREBF1-201ENST00000261646 ADORA2AP29274 412 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 S100A3P33764 101 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 CD86P42081 329 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 TRIP4Q15650 581 aaPredicted RBP16.22■□□□□ 0.19
SREBF1-201ENST00000261646 STXBP5Q5T5C0 1151 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 ZNF605Q86T29 641 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 LZTR1Q8N653 840 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 FEM1AQ9BSK4 669 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 TUT1Q9H6E5 874 aaKnown RBP16.22■□□□□ 0.19
SREBF1-201ENST00000261646 SPASTQ9UBP0 616 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 PSMD11O00231 422 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 CD3EAPO15446 510 aaKnown RBP16.22■□□□□ 0.19
SREBF1-201ENST00000261646 DLX3O60479 287 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 NDUFS2O75306 463 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 SERPINF2P08697 491 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 NPR3P17342 541 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 PPP1R8Q12972 351 aaKnown RBP16.22■□□□□ 0.19
SREBF1-201ENST00000261646 TGFBIQ15582 683 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 AARS2Q5JTZ9 985 aaKnown RBP16.22■□□□□ 0.19
SREBF1-201ENST00000261646 BBS7Q8IWZ6 715 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 TTC30BQ8N4P2 665 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 CINPQ9BW66 212 aaPredicted RBP16.22■□□□□ 0.19
SREBF1-201ENST00000261646 H3BNH8 94 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 FFAR3O14843 346 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 GPR42O15529 346 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 YWHAQP27348 245 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 ASPAP45381 313 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 ZNF621Q6ZSS3 439 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 PROSER1Q86XN7 944 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 ROPN1LQ96C74 230 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 FAIMQ9NVQ4 179 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 CRLS1Q9UJA2 301 aa16.22■□□□□ 0.19
SREBF1-201ENST00000261646 CCL22O00626 93 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 NPM3O75607 178 aaKnown RBP16.21■□□□□ 0.19
SREBF1-201ENST00000261646 MT-CYBP00156 380 aaPredicted RBP16.21■□□□□ 0.19
SREBF1-201ENST00000261646 SOAT1P35610 550 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 ARL2P36404 184 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 WNT3AP56704 352 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 DNASE1L3Q13609 305 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 HAPLN3Q96S86 360 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 PEBP4Q96S96 227 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 HBEGFQ99075 208 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 TEX12Q9BXU0 123 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 CLPBQ9H078 707 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 SOX17Q9H6I2 414 aaPredicted RBP16.21■□□□□ 0.19
SREBF1-201ENST00000261646 KLQ9UEF7 1012 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 AQP12BA6NM10 295 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 PTPN1P18031 435 aaKnown RBP16.21■□□□□ 0.19
SREBF1-201ENST00000261646 L1CAMP32004 1257 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 ARPC4P59998 168 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 ZFP69Q49AA0 526 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 LUZP2Q86TE4 346 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 AQP12AQ8IXF9 295 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 FAM45AQ8TCE6 357 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 HASPINQ8TF76 798 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 RSPH1Q8WYR4 309 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 ZDHHC7Q9NXF8 308 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 PTBP2Q9UKA9 531 aaKnown RBP16.21■□□□□ 0.19
SREBF1-201ENST00000261646 WBP11Q9Y2W2 641 aaKnown RBP16.21■□□□□ 0.19
SREBF1-201ENST00000261646 NOBOXO60393 691 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 RPS12P25398 132 aaKnown RBP16.21■□□□□ 0.19
SREBF1-201ENST00000261646 PPP3CCP48454 512 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 NIPAL1Q6NVV3 410 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 SLC27A1Q6PCB7 646 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 KBTBD8Q8NFY9 601 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 CLEC4CQ8WTT0 213 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 MUC3BQ9H195 1237 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 ZNF112Q9UJU3 913 aa16.21■□□□□ 0.19
SREBF1-201ENST00000261646 H0Y858 1186 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 GPR25O00155 361 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 SNNO75324 88 aaPredicted RBP16.2■□□□□ 0.18
SREBF1-201ENST00000261646 CLPXO76031 633 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 RPL38P63173 70 aaKnown RBP16.2■□□□□ 0.18
SREBF1-201ENST00000261646 EFEMP1Q12805 493 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms