RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 TMEM9BQ9NQ34 198 aa16.82■□□□□ 0.28
SDCBP-201ENST00000260130 KLHL8Q9P2G9 620 aaPredicted RBP16.82■□□□□ 0.28
SDCBP-201ENST00000260130 TRHDEQ9UKU6 1024 aa16.82■□□□□ 0.28
SDCBP-201ENST00000260130 CHKBQ9Y259 395 aa16.82■□□□□ 0.28
SDCBP-201ENST00000260130 PPIL1Q9Y3C6 166 aa16.82■□□□□ 0.28
SDCBP-201ENST00000260130 A0A087WUV0 522 aaPredicted RBP16.82■□□□□ 0.28
SDCBP-201ENST00000260130 CFAP69A5D8W1 941 aa16.82■□□□□ 0.28
SDCBP-201ENST00000260130 CD68P34810 354 aaPredicted RBP16.82■□□□□ 0.28
SDCBP-201ENST00000260130 C21orf59P57076 290 aa16.82■□□□□ 0.28
SDCBP-201ENST00000260130 KIF19Q2TAC6 998 aa16.82■□□□□ 0.28
SDCBP-201ENST00000260130 STPG1Q5TH74 334 aa16.82■□□□□ 0.28
SDCBP-201ENST00000260130 NETO1Q8TDF5 533 aa16.82■□□□□ 0.28
SDCBP-201ENST00000260130 PCDH9Q9HC56 1237 aa16.82■□□□□ 0.28
SDCBP-201ENST00000260130 B4GALT6Q9UBX8 382 aa16.82■□□□□ 0.28
SDCBP-201ENST00000260130 CA5BQ9Y2D0 317 aa16.82■□□□□ 0.28
SDCBP-201ENST00000260130 HS3ST3A1Q9Y663 406 aa16.82■□□□□ 0.28
SDCBP-201ENST00000260130 A8MX80 341 aa16.81■□□□□ 0.28
SDCBP-201ENST00000260130 RAD51BO15315 384 aa16.81■□□□□ 0.28
SDCBP-201ENST00000260130 PRLP01236 227 aa16.81■□□□□ 0.28
SDCBP-201ENST00000260130 LIMK1P53667 647 aa16.81■□□□□ 0.28
SDCBP-201ENST00000260130 EPHB1P54762 984 aa16.81■□□□□ 0.28
SDCBP-201ENST00000260130 RPL26P61254 145 aaKnown RBP16.81■□□□□ 0.28
SDCBP-201ENST00000260130 OVGP1Q12889 678 aa16.81■□□□□ 0.28
SDCBP-201ENST00000260130 RALGDSQ12967 914 aa16.81■□□□□ 0.28
SDCBP-201ENST00000260130 IL27RAQ6UWB1 636 aa16.81■□□□□ 0.28
SDCBP-201ENST00000260130 IQCHQ86VS3 1027 aa16.81■□□□□ 0.28
SDCBP-201ENST00000260130 TADA1Q96BN2 335 aa16.81■□□□□ 0.28
SDCBP-201ENST00000260130 KLF6Q99612 283 aaPredicted RBP16.81■□□□□ 0.28
SDCBP-201ENST00000260130 RPL26L1Q9UNX3 145 aaKnown RBP16.81■□□□□ 0.28
SDCBP-201ENST00000260130 R3HDM2Q9Y2K5 976 aaKnown RBP16.81■□□□□ 0.28
SDCBP-201ENST00000260130 SNX11Q9Y5W9 270 aa16.81■□□□□ 0.28
SDCBP-201ENST00000260130 TLR4O00206 839 aa16.81■□□□□ 0.28
SDCBP-201ENST00000260130 KCNN4O15554 427 aa16.81■□□□□ 0.28
SDCBP-201ENST00000260130 ZNF189O75820 626 aaPredicted RBP16.81■□□□□ 0.28
SDCBP-201ENST00000260130 CYP2A6P11509 494 aaPredicted RBP16.81■□□□□ 0.28
SDCBP-201ENST00000260130 C6P13671 934 aa16.81■□□□□ 0.28
SDCBP-201ENST00000260130 SLC14A2Q15849 920 aa16.81■□□□□ 0.28
SDCBP-201ENST00000260130 LIPIQ6XZB0 460 aa16.81■□□□□ 0.28
SDCBP-201ENST00000260130 KDM7AQ6ZMT4 941 aa16.81■□□□□ 0.28
SDCBP-201ENST00000260130 USP45Q70EL2 814 aa16.81■□□□□ 0.28
SDCBP-201ENST00000260130 MINDY1Q8N5J2 469 aa16.81■□□□□ 0.28
SDCBP-201ENST00000260130 SPATA22Q8NHS9 363 aa16.81■□□□□ 0.28
SDCBP-201ENST00000260130 MCCC1Q96RQ3 725 aaPredicted RBP16.81■□□□□ 0.28
SDCBP-201ENST00000260130 C1QTNF7Q9BXJ2 289 aa16.81■□□□□ 0.28
SDCBP-201ENST00000260130 USP29Q9HBJ7 922 aa16.81■□□□□ 0.28
SDCBP-201ENST00000260130 COQ6Q9Y2Z9 468 aa16.81■□□□□ 0.28
SDCBP-201ENST00000260130 PI4KAP42356 2102 aa16.8■□□□□ 0.28
SDCBP-201ENST00000260130 ESYT3A0FGR9 886 aa16.8■□□□□ 0.28
SDCBP-201ENST00000260130 C4orf47A7E2U8 309 aa16.8■□□□□ 0.28
SDCBP-201ENST00000260130 LZTS3O60299 673 aaPredicted RBP16.8■□□□□ 0.28
SDCBP-201ENST00000260130 MAGEC1O60732 1142 aa16.8■□□□□ 0.28
SDCBP-201ENST00000260130 MT-CYBP00156 380 aaPredicted RBP16.8■□□□□ 0.28
SDCBP-201ENST00000260130 FAM153BP0C7A2 387 aa16.8■□□□□ 0.28
SDCBP-201ENST00000260130 ELFN1P0C7U0 828 aa16.8■□□□□ 0.28
SDCBP-201ENST00000260130 CTPS1P17812 591 aa16.8■□□□□ 0.28
SDCBP-201ENST00000260130 NFKB1P19838 968 aa16.8■□□□□ 0.28
SDCBP-201ENST00000260130 VIPR1P32241 457 aa16.8■□□□□ 0.28
SDCBP-201ENST00000260130 CTSKP43235 329 aa16.8■□□□□ 0.28
SDCBP-201ENST00000260130 CLDN2P57739 230 aa16.8■□□□□ 0.28
SDCBP-201ENST00000260130 FAM153CQ494X1 144 aa16.8■□□□□ 0.28
SDCBP-201ENST00000260130 DENND6BQ8NEG7 585 aa16.8■□□□□ 0.28
SDCBP-201ENST00000260130 SLC35B2Q8TB61 432 aa16.8■□□□□ 0.28
SDCBP-201ENST00000260130 FAM174AQ8TBP5 190 aa16.8■□□□□ 0.28
SDCBP-201ENST00000260130 ACTRT1Q8TDG2 376 aa16.8■□□□□ 0.28
SDCBP-201ENST00000260130 CENPTQ96BT3 561 aa16.8■□□□□ 0.28
SDCBP-201ENST00000260130 KLHDC7BQ96G42 594 aa16.8■□□□□ 0.28
SDCBP-201ENST00000260130 BMFQ96LC9 184 aa16.8■□□□□ 0.28
SDCBP-201ENST00000260130 FCRL5Q96RD9 977 aa16.8■□□□□ 0.28
SDCBP-201ENST00000260130 FAM153AQ9UHL3 310 aa16.8■□□□□ 0.28
SDCBP-201ENST00000260130 A0A0J9YYE9 177 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 H0Y8X5 98 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 FPGTO14772 594 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 RAD51CO43502 376 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 STK10O94804 968 aaKnown RBP16.79■□□□□ 0.28
SDCBP-201ENST00000260130 TRBC1P01850 177 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 SDHBP21912 280 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 HNF1BP35680 557 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 CUL1Q13616 776 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 AGERQ15109 404 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 SKIDA1Q1XH10 827 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 RSPO4Q2I0M5 234 aaPredicted RBP16.79■□□□□ 0.28
SDCBP-201ENST00000260130 HLA-BQ31612 363 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 GCNT7Q6ZNI0 430 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 ABI3BPQ7Z7G0 1075 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 LPCAT1Q8NF37 534 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 OR2I1PQ8NGU4 316 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 ADGRE3Q9BY15 652 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 FRMD8P1Q9BZ68 369 aaPredicted RBP16.79■□□□□ 0.28
SDCBP-201ENST00000260130 GAREM1Q9H706 876 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 CDV3Q9UKY7 258 aaKnown RBP16.79■□□□□ 0.28
SDCBP-201ENST00000260130 PLXNA2O75051 1894 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 DNAH14Q0VDD8 3507 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 POM121BA6NF01 834 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 NPIPB15A6NHN6 443 aaPredicted RBP16.79■□□□□ 0.28
SDCBP-201ENST00000260130 ANKRD66B4E2M5 251 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 KRT14P02533 472 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 ALPIP09923 528 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 CDK18Q07002 472 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 PTPRRQ15256 657 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 ANKRD20A2Q5SQ80 823 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms