RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 NOVA1P51513 510 aaKnown RBP8.54□□□□□ -1.04
TMEM258-201ENST00000257262 EIF3EP60228 445 aaKnown RBP8.54□□□□□ -1.04
TMEM258-201ENST00000257262 PTSQ03393 145 aa8.54□□□□□ -1.04
TMEM258-201ENST00000257262 FZD2Q14332 565 aa8.54□□□□□ -1.04
TMEM258-201ENST00000257262 INPP5AQ14642 412 aa8.54□□□□□ -1.04
TMEM258-201ENST00000257262 ACOX1Q15067 660 aa8.54□□□□□ -1.04
TMEM258-201ENST00000257262 IRF4Q15306 451 aa8.54□□□□□ -1.04
TMEM258-201ENST00000257262 CNGA3Q16281 694 aa8.54□□□□□ -1.04
TMEM258-201ENST00000257262 ZNF542PQ5EBM4 170 aa8.54□□□□□ -1.04
TMEM258-201ENST00000257262 TPRG1LQ5T0D9 272 aa8.54□□□□□ -1.04
TMEM258-201ENST00000257262 CRTC1Q6UUV9 634 aa8.54□□□□□ -1.04
TMEM258-201ENST00000257262 USP45Q70EL2 814 aa8.54□□□□□ -1.04
TMEM258-201ENST00000257262 KDELC2Q7Z4H8 507 aa8.54□□□□□ -1.04
TMEM258-201ENST00000257262 HSD11B1LQ7Z5J1 315 aa8.54□□□□□ -1.04
TMEM258-201ENST00000257262 PTAR1Q7Z6K3 402 aaPredicted RBP8.54□□□□□ -1.04
TMEM258-201ENST00000257262 TSPAN33Q86UF1 283 aa8.54□□□□□ -1.04
TMEM258-201ENST00000257262 ZNF567Q8N184 647 aa8.54□□□□□ -1.04
TMEM258-201ENST00000257262 CBARPQ8N350 705 aaPredicted RBP8.54□□□□□ -1.04
TMEM258-201ENST00000257262 OXR1Q8N573 874 aa8.54□□□□□ -1.04
TMEM258-201ENST00000257262 PLA2G15Q8NCC3 412 aa8.54□□□□□ -1.04
TMEM258-201ENST00000257262 LPCAT1Q8NF37 534 aa8.54□□□□□ -1.04
TMEM258-201ENST00000257262 RHBDD1Q8TEB9 315 aa8.54□□□□□ -1.04
TMEM258-201ENST00000257262 SAP25Q8TEE9 199 aa8.54□□□□□ -1.04
TMEM258-201ENST00000257262 ANP32BQ92688 251 aaKnown RBP8.54□□□□□ -1.04
TMEM258-201ENST00000257262 TADA1Q96BN2 335 aa8.54□□□□□ -1.04
TMEM258-201ENST00000257262 COQ10AQ96MF6 247 aa8.54□□□□□ -1.04
TMEM258-201ENST00000257262 QKIQ96PU8 341 aaKnown RBP eCLIP8.54□□□□□ -1.04
TMEM258-201ENST00000257262 MCCC1Q96RQ3 725 aaPredicted RBP8.54□□□□□ -1.04
TMEM258-201ENST00000257262 TMUB1Q9BVT8 246 aa8.54□□□□□ -1.04
TMEM258-201ENST00000257262 SLC25A51Q9H1U9 297 aa8.54□□□□□ -1.04
TMEM258-201ENST00000257262 GPR27Q9NS67 375 aa8.54□□□□□ -1.04
TMEM258-201ENST00000257262 UBP1Q9NZI7 540 aa8.54□□□□□ -1.04
TMEM258-201ENST00000257262 PCOLCE2Q9UKZ9 415 aa8.54□□□□□ -1.04
TMEM258-201ENST00000257262 BTBD3Q9Y2F9 522 aa8.54□□□□□ -1.04
TMEM258-201ENST00000257262 GON4LQ3T8J9 2241 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 SPAARA0A1B0GVQ0 90 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 TCRBV7S2A1N4TA0A589 114 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 MED19A0JLT2 244 aaPredicted RBP8.53□□□□□ -1.04
TMEM258-201ENST00000257262 GOLGA6L9A6NEM1 432 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 ANKRD66B4E2M5 251 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 TOR1BO14657 336 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 FLRT2O43155 660 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 SDC3O75056 442 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 CBFA2T3O75081 653 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 PCCBP05166 539 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 ITGAVP06756 1048 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 EPHA8P29322 1005 aaPredicted RBP8.53□□□□□ -1.04
TMEM258-201ENST00000257262 ETV3P41162 512 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 THOP1P52888 689 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 RPL26P61254 145 aaKnown RBP8.53□□□□□ -1.04
TMEM258-201ENST00000257262 YPEL5P62699 121 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 CDK18Q07002 472 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 KLF1Q13351 362 aaPredicted RBP8.53□□□□□ -1.04
TMEM258-201ENST00000257262 ARHGEF7Q14155 803 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 PTK2BQ14289 1009 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 GALNT3Q14435 633 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 RPS6KA1Q15418 735 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 TRIP6Q15654 476 aaKnown RBP8.53□□□□□ -1.04
TMEM258-201ENST00000257262 PCSK7Q16549 785 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 QPCTQ16769 361 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 N4BP2L1Q5TBK1 243 aaPredicted RBP8.53□□□□□ -1.04
TMEM258-201ENST00000257262 LRRC66Q68CR7 880 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 DARS2Q6PI48 645 aaKnown RBP8.53□□□□□ -1.04
TMEM258-201ENST00000257262 UBE2Q2Q8WVN8 375 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 IFT43Q96FT9 208 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 PDLIM2Q96JY6 352 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 TRIB3Q96RU7 358 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 VAT1Q99536 393 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 APOOQ9BUR5 198 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 MLPHQ9BV36 600 aaPredicted RBP8.53□□□□□ -1.04
TMEM258-201ENST00000257262 ADGRE3Q9BY15 652 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 KCNF1Q9H3M0 494 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 DNAJC28Q9NX36 388 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 KLHL8Q9P2G9 620 aaPredicted RBP8.53□□□□□ -1.04
TMEM258-201ENST00000257262 CD84Q9UIB8 345 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 TRHDEQ9UKU6 1024 aa8.53□□□□□ -1.04
TMEM258-201ENST00000257262 RPL26L1Q9UNX3 145 aaKnown RBP8.53□□□□□ -1.04
TMEM258-201ENST00000257262 CAPN8A6NHC0 703 aa8.52□□□□□ -1.05
TMEM258-201ENST00000257262 F5H423 210 aaPredicted RBP8.52□□□□□ -1.05
TMEM258-201ENST00000257262 K7ESM1 405 aa8.52□□□□□ -1.05
TMEM258-201ENST00000257262 PSMD11O00231 422 aa8.52□□□□□ -1.05
TMEM258-201ENST00000257262 YKT6O15498 198 aa8.52□□□□□ -1.05
TMEM258-201ENST00000257262 KCNN4O15554 427 aa8.52□□□□□ -1.05
TMEM258-201ENST00000257262 PMPCBO75439 489 aa8.52□□□□□ -1.05
TMEM258-201ENST00000257262 PIAS2O75928 621 aa8.52□□□□□ -1.05
TMEM258-201ENST00000257262 CLDN7O95471 211 aa8.52□□□□□ -1.05
TMEM258-201ENST00000257262 CSF2P04141 144 aa8.52□□□□□ -1.05
TMEM258-201ENST00000257262 C1SP09871 688 aa8.52□□□□□ -1.05
TMEM258-201ENST00000257262 ZNF30P17039 623 aa8.52□□□□□ -1.05
TMEM258-201ENST00000257262 DGKAP23743 735 aa8.52□□□□□ -1.05
TMEM258-201ENST00000257262 TRIM23P36406 574 aa8.52□□□□□ -1.05
TMEM258-201ENST00000257262 GRK6P43250 576 aa8.52□□□□□ -1.05
TMEM258-201ENST00000257262 EIF2B5Q13144 721 aaKnown RBP8.52□□□□□ -1.05
TMEM258-201ENST00000257262 MTM1Q13496 603 aa8.52□□□□□ -1.05
TMEM258-201ENST00000257262 CDKN3Q16667 212 aa8.52□□□□□ -1.05
TMEM258-201ENST00000257262 ANKRD20A2Q5SQ80 823 aa8.52□□□□□ -1.05
TMEM258-201ENST00000257262 SEL1L2Q5TEA6 688 aa8.52□□□□□ -1.05
TMEM258-201ENST00000257262 ANKRD20A1Q5TYW2 823 aa8.52□□□□□ -1.05
TMEM258-201ENST00000257262 ANKRD20A3Q5VUR7 823 aa8.52□□□□□ -1.05
TMEM258-201ENST00000257262 PNCKQ6P2M8 343 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms