RNA–Protein interactions for RNA: ENST00000252085.3

PCDHGA12-201, Transcript of protocadherin gamma subfamily A, 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA12, Length 4,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12-201ENST00000252085 LINC00032P0C843 101 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 IMPDH2P12268 514 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 GABRR2P28476 465 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 CHN2P52757 468 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 RNF220Q5VTB9 566 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 RFWD3Q6PCD5 774 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 LDB1Q86U70 411 aaPredicted RBP12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 FAM228AQ86W67 206 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 SUSD6Q92537 303 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 TBATAQ96M53 351 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 CHID1Q9BWS9 393 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 PLK2Q9NYY3 685 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 FBXW11Q9UKB1 542 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 SCN11AQ9UI33 1791 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 PPEF2O14830 753 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 COX7A2P14406 83 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 SELPP16109 830 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 SLC16A1P53985 500 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 RPL38P63173 70 aaKnown RBP12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 OGDHQ02218 1023 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 SEMA5AQ13591 1074 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 FAM187BQ17R55 369 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 FAM151BQ6UXP7 276 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 RBM15BQ8NDT2 890 aaKnown RBP12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 ASZ1Q8WWH4 475 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 PPP3R2Q96LZ3 170 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 DEFB118Q96PH6 123 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 CLEC4MQ9H2X3 399 aaPredicted RBP12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 A8MUI8 341 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 SLC9A3R1O14745 358 aaPredicted RBP12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 MATN3O15232 486 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 KCNH1O95259 989 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 GSTM1P09488 218 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 TACR2P21452 398 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 NAA20P61599 178 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 RIPK1Q13546 671 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 NR1D2Q14995 579 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 MAPKAPK3Q16644 382 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 ESRP1Q6NXG1 681 aaKnown RBP12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 RD3Q7Z3Z2 195 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 NAT8LQ8N9F0 302 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 BANPQ8N9N5 519 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 PTCD2Q8WV60 388 aaKnown RBP12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 REPS1Q96D71 796 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 DGCR14Q96DF8 476 aaKnown RBP12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 SLC25A51Q9H1U9 297 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 RNF39Q9H2S5 420 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 ZNHIT2Q9UHR6 403 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 SNX6Q9UNH7 406 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 A0A087WXM4 84 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 TBC1D3BA6NDS4 549 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 CCL22O00626 93 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 RPP40O75818 363 aaKnown RBP12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 ATG7O95352 703 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 NDST3O95803 873 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 ADH1AP07327 375 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 HTR7P34969 479 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 GSSP48637 474 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 SLC5A9Q2M3M2 681 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 TIGD5Q53EQ6 642 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 FSTL4Q6MZW2 842 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 TXNDC11Q6PKC3 985 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 CAMK1DQ8IU85 385 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 OR8H2Q8N162 312 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 HIPK3Q9H422 1215 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 TMEM216Q9P0N5 145 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 PRPF19Q9UMS4 504 aaKnown RBP12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 TCAF1Q9Y4C2 921 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 AK5Q9Y6K8 562 aa12.73□□□□□ -0.37
PCDHGA12-201ENST00000252085 KIF13AQ9H1H9 1805 aa12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 FKTNO75072 461 aa12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 OTCP00480 354 aa12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 NMBRP28336 390 aa12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 PPP2R1BP30154 601 aa12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 FOXN2P32314 431 aa12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 FSTL1Q12841 308 aa12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 NEDD8Q15843 81 aa12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 ARL13AQ5H913 290 aaPredicted RBP12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 SYPL2Q5VXT5 272 aa12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 CNSTQ6PJW8 725 aa12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 ZNF276Q8N554 614 aa12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 LMO3Q8TAP4 145 aa12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 COPS8Q99627 209 aa12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 TRIM43BA6NCK2 446 aa12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 IPO13O94829 963 aaKnown RBP12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 C1RP00736 705 aa12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 CORO1AP31146 461 aaKnown RBP12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 TTKP33981 857 aa12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 MSX2P35548 267 aaPredicted RBP12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 NR1H2P55055 460 aa12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 WDR4P57081 412 aaKnown RBP12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 TUBA1BP68363 451 aa12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 CCL14Q16627 93 aa12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 CPSF6Q16630 551 aaKnown RBP eCLIP12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 FAM182AQ5T1J6 154 aa12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 VWA5B1Q5TIE3 1220 aa12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 CDCA2Q69YH5 1023 aaPredicted RBP12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 PLEKHM3Q6ZWE6 761 aa12.72□□□□□ -0.37
PCDHGA12-201ENST00000252085 TUBA1AQ71U36 451 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms