RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 CCDC74BQ96LY2 380 aa13.86□□□□□ -0.19
DDX39A-201ENST00000242776 CHP1Q99653 195 aa13.86□□□□□ -0.19
DDX39A-201ENST00000242776 SYT11Q9BT88 431 aa13.86□□□□□ -0.19
DDX39A-201ENST00000242776 MAGEH1Q9H213 219 aa13.86□□□□□ -0.19
DDX39A-201ENST00000242776 LUC7LQ9NQ29 371 aaKnown RBP13.86□□□□□ -0.19
DDX39A-201ENST00000242776 TMEM248Q9NWD8 314 aa13.86□□□□□ -0.19
DDX39A-201ENST00000242776 CYP1A1P04798 512 aaPredicted RBP13.85□□□□□ -0.19
DDX39A-201ENST00000242776 FGF3P11487 239 aaPredicted RBP13.85□□□□□ -0.19
DDX39A-201ENST00000242776 CHRNB2P17787 502 aa13.85□□□□□ -0.19
DDX39A-201ENST00000242776 CR2P20023 1033 aa13.85□□□□□ -0.19
DDX39A-201ENST00000242776 CDH5P33151 784 aaPredicted RBP13.85□□□□□ -0.19
DDX39A-201ENST00000242776 ADRA1BP35368 520 aa13.85□□□□□ -0.19
DDX39A-201ENST00000242776 CCR10P46092 362 aa13.85□□□□□ -0.19
DDX39A-201ENST00000242776 NSFP46459 744 aaKnown RBP13.85□□□□□ -0.19
DDX39A-201ENST00000242776 GABRB2P47870 512 aa13.85□□□□□ -0.19
DDX39A-201ENST00000242776 ARSDP51689 593 aa13.85□□□□□ -0.19
DDX39A-201ENST00000242776 NOMO3P69849 1222 aa13.85□□□□□ -0.19
DDX39A-201ENST00000242776 FOXK1P85037 733 aa13.85□□□□□ -0.19
DDX39A-201ENST00000242776 B4GALNT1Q00973 533 aa13.85□□□□□ -0.19
DDX39A-201ENST00000242776 BIRC2Q13490 618 aa13.85□□□□□ -0.19
DDX39A-201ENST00000242776 HLTFQ14527 1009 aaKnown RBP eCLIP13.85□□□□□ -0.19
DDX39A-201ENST00000242776 SLC18A3Q16572 532 aa13.85□□□□□ -0.19
DDX39A-201ENST00000242776 CLEC16AQ2KHT3 1053 aa13.85□□□□□ -0.19
DDX39A-201ENST00000242776 C4orf17Q53FE4 359 aa13.85□□□□□ -0.19
DDX39A-201ENST00000242776 EFHC2Q5JST6 749 aa13.85□□□□□ -0.19
DDX39A-201ENST00000242776 MANEALQ5VSG8 457 aa13.85□□□□□ -0.19
DDX39A-201ENST00000242776 NKAIN2Q5VXU1 208 aa13.85□□□□□ -0.19
DDX39A-201ENST00000242776 NAA35Q5VZE5 725 aa13.85□□□□□ -0.19
DDX39A-201ENST00000242776 TMEM139Q8IV31 216 aa13.85□□□□□ -0.19
DDX39A-201ENST00000242776 CCDC185Q8N715 623 aa13.85□□□□□ -0.19
DDX39A-201ENST00000242776 RXFP2Q8WXD0 754 aa13.85□□□□□ -0.19
DDX39A-201ENST00000242776 RNF31Q96EP0 1072 aa13.85□□□□□ -0.19
DDX39A-201ENST00000242776 ZMYND15Q9H091 742 aa13.85□□□□□ -0.19
DDX39A-201ENST00000242776 ADNPQ9H2P0 1102 aa13.85□□□□□ -0.19
DDX39A-201ENST00000242776 TMEM59LQ9UK28 342 aa13.85□□□□□ -0.19
DDX39A-201ENST00000242776 PLAAQ9Y263 795 aa13.85□□□□□ -0.19
DDX39A-201ENST00000242776 LRRK2Q5S007 2527 aa13.84□□□□□ -0.19
DDX39A-201ENST00000242776 BLACEA4D250 179 aa13.84□□□□□ -0.19
DDX39A-201ENST00000242776 SOWAHDA6NJG2 315 aa13.84□□□□□ -0.19
DDX39A-201ENST00000242776 RHPN2P1A8MT19 583 aa13.84□□□□□ -0.19
DDX39A-201ENST00000242776 CACNB4O00305 520 aaPredicted RBP13.84□□□□□ -0.19
DDX39A-201ENST00000242776 GZMAP12544 262 aa13.84□□□□□ -0.19
DDX39A-201ENST00000242776 CD82P27701 267 aa13.84□□□□□ -0.19
DDX39A-201ENST00000242776 MTM1Q13496 603 aa13.84□□□□□ -0.19
DDX39A-201ENST00000242776 CYTH1Q15438 398 aa13.84□□□□□ -0.19
DDX39A-201ENST00000242776 SPA17Q15506 151 aa13.84□□□□□ -0.19
DDX39A-201ENST00000242776 UGP2Q16851 508 aa13.84□□□□□ -0.19
DDX39A-201ENST00000242776 ERAP2Q6P179 960 aa13.84□□□□□ -0.19
DDX39A-201ENST00000242776 OGFOD3Q6PK18 319 aa13.84□□□□□ -0.19
DDX39A-201ENST00000242776 BNIPLQ7Z465 357 aa13.84□□□□□ -0.19
DDX39A-201ENST00000242776 ZSWIM9Q86XI8 627 aa13.84□□□□□ -0.19
DDX39A-201ENST00000242776 PYROXD2Q8N2H3 581 aa13.84□□□□□ -0.19
DDX39A-201ENST00000242776 PATE1Q8WXA2 126 aa13.84□□□□□ -0.19
DDX39A-201ENST00000242776 ART4Q93070 314 aa13.84□□□□□ -0.19
DDX39A-201ENST00000242776 LGR4Q9BXB1 951 aa13.84□□□□□ -0.19
DDX39A-201ENST00000242776 NOL6Q9H6R4 1146 aaKnown RBP13.84□□□□□ -0.19
DDX39A-201ENST00000242776 SPATS2LQ9NUQ6 558 aaKnown RBP13.84□□□□□ -0.19
DDX39A-201ENST00000242776 DKK3Q9UBP4 350 aa13.84□□□□□ -0.19
DDX39A-201ENST00000242776 LHX3Q9UBR4 397 aa13.84□□□□□ -0.19
DDX39A-201ENST00000242776 NEU3Q9UQ49 428 aa13.84□□□□□ -0.19
DDX39A-201ENST00000242776 MAN2B2Q9Y2E5 1009 aa13.84□□□□□ -0.19
DDX39A-201ENST00000242776 B3GALT1Q9Y5Z6 326 aa13.84□□□□□ -0.19
DDX39A-201ENST00000242776 TEX15Q9BXT5 2789 aa13.84□□□□□ -0.19
DDX39A-201ENST00000242776 IGHV5-10-1A0A0J9YXX1 117 aa13.83□□□□□ -0.2
DDX39A-201ENST00000242776 DDX3XO00571 662 aaKnown RBP eCLIP13.83□□□□□ -0.2
DDX39A-201ENST00000242776 NKX2-8O15522 239 aa13.83□□□□□ -0.2
DDX39A-201ENST00000242776 DUX1O43812 170 aa13.83□□□□□ -0.2
DDX39A-201ENST00000242776 CPNE6O95741 557 aa13.83□□□□□ -0.2
DDX39A-201ENST00000242776 PNLIPP16233 465 aa13.83□□□□□ -0.2
DDX39A-201ENST00000242776 UGT1A3P35503 534 aa13.83□□□□□ -0.2
DDX39A-201ENST00000242776 ASTE1Q2TB18 679 aaPredicted RBP13.83□□□□□ -0.2
DDX39A-201ENST00000242776 CCDC14Q49A88 953 aa13.83□□□□□ -0.2
DDX39A-201ENST00000242776 CCDC122Q5T0U0 273 aa13.83□□□□□ -0.2
DDX39A-201ENST00000242776 ALKBH5Q6P6C2 394 aaKnown RBP13.83□□□□□ -0.2
DDX39A-201ENST00000242776 FAM129CQ86XR2 697 aa13.83□□□□□ -0.2
DDX39A-201ENST00000242776 CAMK1DQ8IU85 385 aa13.83□□□□□ -0.2
DDX39A-201ENST00000242776 NRSN1Q8IZ57 195 aa13.83□□□□□ -0.2
DDX39A-201ENST00000242776 CACNA2D3Q8IZS8 1091 aa13.83□□□□□ -0.2
DDX39A-201ENST00000242776 PELI3Q8N2H9 469 aa13.83□□□□□ -0.2
DDX39A-201ENST00000242776 TXLNBQ8N3L3 684 aa13.83□□□□□ -0.2
DDX39A-201ENST00000242776 JOSD2Q8TAC2 188 aa13.83□□□□□ -0.2
DDX39A-201ENST00000242776 SLC30A5Q8TAD4 765 aa13.83□□□□□ -0.2
DDX39A-201ENST00000242776 ZDHHC1Q8WTX9 485 aa13.83□□□□□ -0.2
DDX39A-201ENST00000242776 TRIM11Q96F44 468 aa13.83□□□□□ -0.2
DDX39A-201ENST00000242776 TAAR9Q96RI9 348 aa13.83□□□□□ -0.2
DDX39A-201ENST00000242776 SUV39H2Q9H5I1 410 aa13.83□□□□□ -0.2
DDX39A-201ENST00000242776 DGKBQ9Y6T7 804 aa13.83□□□□□ -0.2
DDX39A-201ENST00000242776 NBPF19A0A087WUL8 3843 aa13.82□□□□□ -0.2
DDX39A-201ENST00000242776 A0A087X0T9 212 aa13.82□□□□□ -0.2
DDX39A-201ENST00000242776 EIF3CLB5ME19 914 aaKnown RBP13.82□□□□□ -0.2
DDX39A-201ENST00000242776 NUDT21O43809 227 aaKnown RBP13.82□□□□□ -0.2
DDX39A-201ENST00000242776 BUB1BO60566 1050 aaPredicted RBP13.82□□□□□ -0.2
DDX39A-201ENST00000242776 RECQL5O94762 991 aaPredicted RBP13.82□□□□□ -0.2
DDX39A-201ENST00000242776 NDUFA10O95299 355 aa13.82□□□□□ -0.2
DDX39A-201ENST00000242776 FAM228BP0C875 321 aa13.82□□□□□ -0.2
DDX39A-201ENST00000242776 UNGP13051 313 aaPredicted RBP13.82□□□□□ -0.2
DDX39A-201ENST00000242776 AK4P27144 223 aaPredicted RBP13.82□□□□□ -0.2
DDX39A-201ENST00000242776 SCNN1AP37088 669 aa13.82□□□□□ -0.2
DDX39A-201ENST00000242776 CASRP41180 1078 aa13.82□□□□□ -0.2
DDX39A-201ENST00000242776 CCZ1BP86790 482 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms