RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 XKR5Q6UX68 686 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 TUBA1AQ71U36 451 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 TMEM126BQ8IUX1 230 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 PLD5Q8N7P1 536 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 SLC44A1Q8WWI5 657 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 P2RY11Q96G91 374 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 PCDH12Q9NPG4 1184 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 MYOCOSA0A1B0GUC4 107 aa11□□□□□ -0.65
COPA-201ENST00000241704 J3QRK9 145 aa11□□□□□ -0.65
COPA-201ENST00000241704 EOMESO95936 686 aa11□□□□□ -0.65
COPA-201ENST00000241704 HOXB8P17481 243 aaPredicted RBP11□□□□□ -0.65
COPA-201ENST00000241704 PRKAA1Q13131 559 aa11□□□□□ -0.65
COPA-201ENST00000241704 ABRAXAS1Q6UWZ7 409 aa11□□□□□ -0.65
COPA-201ENST00000241704 EFHD2Q96C19 240 aaPredicted RBP11□□□□□ -0.65
COPA-201ENST00000241704 FBXL8Q96CD0 374 aa11□□□□□ -0.65
COPA-201ENST00000241704 RIPOR3Q96MK2 946 aa11□□□□□ -0.65
COPA-201ENST00000241704 CEP44Q9C0F1 390 aa11□□□□□ -0.65
COPA-201ENST00000241704 DEC1Q9P2X7 70 aa11□□□□□ -0.65
COPA-201ENST00000241704 MYH7P12883 1935 aa11□□□□□ -0.65
COPA-201ENST00000241704 CLDN25C9JDP6 229 aa11□□□□□ -0.65
COPA-201ENST00000241704 CCL16O15467 120 aa11□□□□□ -0.65
COPA-201ENST00000241704 TRIM13O60858 407 aa11□□□□□ -0.65
COPA-201ENST00000241704 ZNF7P17097 686 aaPredicted RBP11□□□□□ -0.65
COPA-201ENST00000241704 PRDX6P30041 224 aa11□□□□□ -0.65
COPA-201ENST00000241704 BNIP3Q12983 259 aa11□□□□□ -0.65
COPA-201ENST00000241704 CCNIQ14094 377 aa11□□□□□ -0.65
COPA-201ENST00000241704 NEPROQ6NW34 567 aa11□□□□□ -0.65
COPA-201ENST00000241704 USP45Q70EL2 814 aa11□□□□□ -0.65
COPA-201ENST00000241704 ISOC1Q96CN7 298 aa11□□□□□ -0.65
COPA-201ENST00000241704 AHCYL2Q96HN2 611 aaKnown RBP11□□□□□ -0.65
COPA-201ENST00000241704 DEPDC7Q96QD5 511 aa11□□□□□ -0.65
COPA-201ENST00000241704 CYP4F12Q9HCS2 524 aa11□□□□□ -0.65
COPA-201ENST00000241704 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11□□□□□ -0.65
COPA-201ENST00000241704 SFMBT1Q9UHJ3 866 aa11□□□□□ -0.65
COPA-201ENST00000241704 PCDHA11Q9Y5I1 949 aa11□□□□□ -0.65
COPA-201ENST00000241704 NAV1Q8NEY1 1877 aa11□□□□□ -0.65
COPA-201ENST00000241704 PAPSS1O43252 624 aaPredicted RBP11□□□□□ -0.65
COPA-201ENST00000241704 KRT6AP02538 564 aa11□□□□□ -0.65
COPA-201ENST00000241704 KRT6BP04259 564 aa11□□□□□ -0.65
COPA-201ENST00000241704 CAPN1P07384 714 aa11□□□□□ -0.65
COPA-201ENST00000241704 ENO2P09104 434 aaPredicted RBP11□□□□□ -0.65
COPA-201ENST00000241704 TFE3P19532 575 aaPredicted RBP11□□□□□ -0.65
COPA-201ENST00000241704 LMO2P25791 158 aa11□□□□□ -0.65
COPA-201ENST00000241704 CDK18Q07002 472 aa11□□□□□ -0.65
COPA-201ENST00000241704 BOP1Q14137 746 aaKnown RBP11□□□□□ -0.65
COPA-201ENST00000241704 FAM91A1Q658Y4 838 aa11□□□□□ -0.65
COPA-201ENST00000241704 DUS1LQ6P1R4 473 aaKnown RBP11□□□□□ -0.65
COPA-201ENST00000241704 C16orf46Q6P387 395 aa11□□□□□ -0.65
COPA-201ENST00000241704 SLC22A9Q8IVM8 553 aa11□□□□□ -0.65
COPA-201ENST00000241704 DHRSXQ8N5I4 330 aa11□□□□□ -0.65
COPA-201ENST00000241704 CERS2Q96G23 380 aa11□□□□□ -0.65
COPA-201ENST00000241704 PCED1BQ96HM7 432 aa11□□□□□ -0.65
COPA-201ENST00000241704 UNC93B1Q9H1C4 597 aa11□□□□□ -0.65
COPA-201ENST00000241704 TMEM161AQ9NX61 479 aa11□□□□□ -0.65
COPA-201ENST00000241704 DYRK1BQ9Y463 629 aa11□□□□□ -0.65
COPA-201ENST00000241704 INSL6Q9Y581 213 aa11□□□□□ -0.65
COPA-201ENST00000241704 SLC10A3P09131 477 aa11□□□□□ -0.65
COPA-201ENST00000241704 RXRGP48443 463 aa11□□□□□ -0.65
COPA-201ENST00000241704 PRKAA2P54646 552 aa11□□□□□ -0.65
COPA-201ENST00000241704 SOWAHAQ2M3V2 549 aa11□□□□□ -0.65
COPA-201ENST00000241704 TBCELQ5QJ74 424 aa11□□□□□ -0.65
COPA-201ENST00000241704 IRAK1BP1Q5VVH5 260 aa11□□□□□ -0.65
COPA-201ENST00000241704 DCDC5Q6ZRR9 648 aa11□□□□□ -0.65
COPA-201ENST00000241704 CXorf40AQ8TE69 158 aa11□□□□□ -0.65
COPA-201ENST00000241704 GLMNQ92990 594 aa11□□□□□ -0.65
COPA-201ENST00000241704 MCRS1Q96EZ8 462 aa11□□□□□ -0.65
COPA-201ENST00000241704 MAGEB10Q96LZ2 347 aaPredicted RBP11□□□□□ -0.65
COPA-201ENST00000241704 C9orf16Q9BUW7 83 aa11□□□□□ -0.65
COPA-201ENST00000241704 CAPN10Q9HC96 672 aa11□□□□□ -0.65
COPA-201ENST00000241704 ANKRD6Q9Y2G4 727 aa11□□□□□ -0.65
COPA-201ENST00000241704 CEPT1Q9Y6K0 416 aa11□□□□□ -0.65
COPA-201ENST00000241704 TLL2Q9Y6L7 1015 aa11□□□□□ -0.65
COPA-201ENST00000241704 N4BP2Q86UW6 1770 aaPredicted RBP10.99□□□□□ -0.65
COPA-201ENST00000241704 TCRBV9S1A1TA0A576 114 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 NCF1BA6NI72 391 aaPredicted RBP10.99□□□□□ -0.65
COPA-201ENST00000241704 NCF1CA8MVU1 366 aaPredicted RBP10.99□□□□□ -0.65
COPA-201ENST00000241704 TRIM38O00635 465 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 SERPINB7O75635 380 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 NCF1P14598 390 aaPredicted RBP10.99□□□□□ -0.65
COPA-201ENST00000241704 VARSP26640 1264 aaKnown RBP10.99□□□□□ -0.65
COPA-201ENST00000241704 CCND3P30281 292 aaPredicted RBP10.99□□□□□ -0.65
COPA-201ENST00000241704 S100A5P33763 92 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 MAPK8P45983 427 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 KLF10Q13118 480 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 DGUOKQ16854 277 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 POM121L1PQ3SYA9 428 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 RNASEH2BQ5TBB1 312 aaKnown RBP10.99□□□□□ -0.65
COPA-201ENST00000241704 FAM46CQ5VWP2 391 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 GLT6D1Q7Z4J2 308 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 SLC7A5P1Q8MH63 180 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 NAT16Q8N8M0 369 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 RP9Q8TA86 221 aaKnown RBP10.99□□□□□ -0.65
COPA-201ENST00000241704 SERAC1Q96JX3 654 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 UNKQ9C0B0 810 aaKnown RBP10.99□□□□□ -0.65
COPA-201ENST00000241704 TBC1D14Q9P2M4 693 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 COL22A1Q8NFW1 1626 aaPredicted RBP10.99□□□□□ -0.65
COPA-201ENST00000241704 KANSL1LA0AUZ9 987 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 MYBPHLA2RUH7 354 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 DYRK3O43781 588 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 PAGE1O75459 146 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms