RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 NOL4O94818 638 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 OR5F1O95221 314 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 MOCS3O95396 460 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 OLFM2O95897 454 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 CST3P01034 146 aaPredicted RBP3.68□□□□□ -1.82
UFM1-201ENST00000239878 POMCP01189 267 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 POLBP06746 335 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 ATP6V1B1P15313 513 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 CD9P21926 228 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 CRABP2P29373 138 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 HSD17B2P37059 387 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 PPARGP37231 505 aaPredicted RBP3.68□□□□□ -1.82
UFM1-201ENST00000239878 PNPLA4P41247 253 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 NR4A2P43354 598 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 RPL5P46777 297 aaKnown RBP3.68□□□□□ -1.82
UFM1-201ENST00000239878 AGFG1P52594 562 aaKnown RBP3.68□□□□□ -1.82
UFM1-201ENST00000239878 SLC5A3P53794 718 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 STX17P56962 302 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 PRAMEP78395 509 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 CREMQ03060 361 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 DLG1Q12959 904 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 SELENBP1Q13228 472 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 ANO4Q32M45 955 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 RPS26P11Q5JNZ5 115 aaPredicted RBP3.68□□□□□ -1.82
UFM1-201ENST00000239878 NDUFAF5Q5TEU4 345 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 METTL11BQ5VVY1 283 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 ITPRIPL1Q6GPH6 555 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 RPUSD3Q6P087 351 aaKnown RBP3.68□□□□□ -1.82
UFM1-201ENST00000239878 UGT2A3Q6UWM9 527 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 ADAMTSL4Q6UY14 1074 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 RAPH1Q70E73 1250 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 SV2AQ7L0J3 742 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 VSIG1Q86XK7 387 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 GATAD2AQ86YP4 633 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 CLIP4Q8N3C7 705 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 OR10T2Q8NGX3 314 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 CHPT1Q8WUD6 406 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 JADE3Q92613 823 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 ZNF707Q96C28 371 aaPredicted RBP3.68□□□□□ -1.82
UFM1-201ENST00000239878 INTS12Q96CB8 462 aaKnown RBP3.68□□□□□ -1.82
UFM1-201ENST00000239878 FAM84AQ96KN4 292 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 KLHL5Q96PQ7 755 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 HHIPQ96QV1 700 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 CCDC77Q9BR77 488 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 CADM1Q9BY67 442 aaKnown RBP3.68□□□□□ -1.82
UFM1-201ENST00000239878 BHLHE41Q9C0J9 482 aaPredicted RBP3.68□□□□□ -1.82
UFM1-201ENST00000239878 GANQ9H2C0 597 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 NTN4Q9HB63 628 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 MLXIPLQ9NP71 852 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.68□□□□□ -1.82
UFM1-201ENST00000239878 DPP3Q9NY33 737 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 ZNF212Q9UDV6 495 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 AJAP1Q9UKB5 411 aaPredicted RBP3.68□□□□□ -1.82
UFM1-201ENST00000239878 CHKBQ9Y259 395 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 CEPT1Q9Y6K0 416 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.68□□□□□ -1.82
UFM1-201ENST00000239878 C17orf113A0A1B0GUU1 675 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 HHLA1C9JL84 531 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 ATP6V1G2-DDX39BF2Z307 99 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 DDX3XO00571 662 aaKnown RBP eCLIP3.67□□□□□ -1.821e-7■■■■■ 37.2
UFM1-201ENST00000239878 PSMA7O14818 248 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 CLIC2O15247 247 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 ADAM12O43184 909 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 HOXC11O43248 304 aaPredicted RBP3.67□□□□□ -1.82
UFM1-201ENST00000239878 BUD23O43709 281 aaKnown RBP3.67□□□□□ -1.82
UFM1-201ENST00000239878 KRT86O43790 486 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 PHF2O75151 1096 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 LRRN2O75325 713 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 SULT1C4O75897 302 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 P4HA1P13674 534 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 EDN3P14138 238 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 CDH2P19022 906 aaPredicted RBP3.67□□□□□ -1.82
UFM1-201ENST00000239878 AMPD1P23109 780 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 TBXAS1P24557 533 aaPredicted RBP3.67□□□□□ -1.82
UFM1-201ENST00000239878 EEF1GP26641 437 aaKnown RBP3.67□□□□□ -1.82
UFM1-201ENST00000239878 CTNNB1P35222 781 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 PBX3P40426 434 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 ATXN1P54253 815 aaKnown RBP3.67□□□□□ -1.82
UFM1-201ENST00000239878 RNASE9P60153 205 aaKnown RBP3.67□□□□□ -1.82
UFM1-201ENST00000239878 AP2B1P63010 937 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 CYP4F3Q08477 520 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 KCNMA1Q12791 1236 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 DNAJC3Q13217 504 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 SGO2Q562F6 1265 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 ZNF697Q5TEC3 545 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 IZUMO3Q5VZ72 239 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 RNF43Q68DV7 783 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 AAGABQ6PD74 315 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 PAQR9Q6ZVX9 377 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 Q7L0L9 218 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 BHLHA9Q7RTU4 235 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 TMC8Q8IU68 726 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 TICAM1Q8IUC6 712 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 GALNT13Q8IUC8 556 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 THNSL1Q8IYQ7 743 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 RNF152Q8N8N0 203 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 SMRP1Q8NCR6 262 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 FEZF2Q8TBJ5 459 aa3.67□□□□□ -1.82
UFM1-201ENST00000239878 ARHGEF2Q92974 986 aaKnown RBP3.67□□□□□ -1.82
UFM1-201ENST00000239878 PLEKHA8Q96JA3 519 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms