RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 CASQ2O14958 399 aaPredicted RBP16.18■□□□□ 0.18
UBE3D-201ENST00000237186 INSIG1O15503 277 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 HMGA1P17096 107 aaKnown RBP16.18■□□□□ 0.18
UBE3D-201ENST00000237186 ZNF140P52738 457 aaPredicted RBP16.18■□□□□ 0.18
UBE3D-201ENST00000237186 STC1P52823 247 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 GALNT3Q14435 633 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 SEMA3AQ14563 771 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 USP41Q3LFD5 358 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 TCHHL1Q5QJ38 904 aaPredicted RBP16.18■□□□□ 0.18
UBE3D-201ENST00000237186 IL31Q6EBC2 164 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 BNC2Q6ZN30 1099 aaPredicted RBP16.18■□□□□ 0.18
UBE3D-201ENST00000237186 LRRC43Q8N309 656 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 SH3RF2Q8TEC5 729 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 GATA6Q92908 595 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 PTERQ96BW5 349 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 PHF21BQ96EK2 531 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 MYRFLQ96LU7 910 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 NSMCE3Q96MG7 304 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 NR1H4Q96RI1 486 aaPredicted RBP16.18■□□□□ 0.18
UBE3D-201ENST00000237186 CDRT15Q96T59 188 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 TCF12Q99081 682 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 PPP1R12CQ9BZL4 782 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 TFB2MQ9H5Q4 396 aaKnown RBP16.18■□□□□ 0.18
UBE3D-201ENST00000237186 TNFRSF12AQ9NP84 129 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 POLR3BQ9NW08 1133 aaPredicted RBP16.18■□□□□ 0.18
UBE3D-201ENST00000237186 UBA2Q9UBT2 640 aaPredicted RBP16.18■□□□□ 0.18
UBE3D-201ENST00000237186 G3BP2Q9UN86 482 aaKnown RBP16.18■□□□□ 0.18
UBE3D-201ENST00000237186 TBC1D30Q9Y2I9 924 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 H3BNX3 289 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 COCHO43405 550 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 GJB5O95377 273 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 FGF4P08620 206 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 ZNF37AP17032 561 aaPredicted RBP16.18■□□□□ 0.18
UBE3D-201ENST00000237186 PSMD8P48556 350 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 ERFP50548 548 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 OXCT1P55809 520 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 C1QTNF8P60827 252 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 HERVK_113P63132 956 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 CDC16Q13042 620 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 PTPRCAPQ14761 206 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 TAF1AQ15573 450 aaPredicted RBP16.18■□□□□ 0.18
UBE3D-201ENST00000237186 UNC50Q53HI1 259 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 IZUMO2Q6UXV1 221 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 PIM3Q86V86 326 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 ERVK-6Q9BXR3 956 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 VCX3BQ9H321 246 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 AFF4Q9UHB7 1163 aaKnown RBP16.18■□□□□ 0.18
UBE3D-201ENST00000237186 BCAP29Q9UHQ4 241 aa16.18■□□□□ 0.18
UBE3D-201ENST00000237186 BPTFQ12830 3046 aa16.17■□□□□ 0.18
UBE3D-201ENST00000237186 UBFD1O14562 309 aaKnown RBP16.17■□□□□ 0.18
UBE3D-201ENST00000237186 PEX1O43933 1283 aa16.17■□□□□ 0.18
UBE3D-201ENST00000237186 SMIM24O75264 130 aa16.17■□□□□ 0.18
UBE3D-201ENST00000237186 PRLP01236 227 aa16.17■□□□□ 0.18
UBE3D-201ENST00000237186 CXCL10P02778 98 aa16.17■□□□□ 0.18
UBE3D-201ENST00000237186 F11P03951 625 aa16.17■□□□□ 0.18
UBE3D-201ENST00000237186 KLKB1P03952 638 aa16.17■□□□□ 0.18
UBE3D-201ENST00000237186 PDHA1P08559 390 aa16.17■□□□□ 0.18
UBE3D-201ENST00000237186 OR1D2P34982 312 aa16.17■□□□□ 0.18
UBE3D-201ENST00000237186 PLK1P53350 603 aa16.17■□□□□ 0.18
UBE3D-201ENST00000237186 RPS24P62847 133 aaKnown RBP16.17■□□□□ 0.18
UBE3D-201ENST00000237186 PTK2BQ14289 1009 aa16.17■□□□□ 0.18
UBE3D-201ENST00000237186 SQLEQ14534 574 aa16.17■□□□□ 0.18
UBE3D-201ENST00000237186 MAPRE2Q15555 327 aa16.17■□□□□ 0.18
UBE3D-201ENST00000237186 SPNS2Q8IVW8 549 aa16.17■□□□□ 0.18
UBE3D-201ENST00000237186 EFCAB3Q8N7B9 438 aa16.17■□□□□ 0.18
UBE3D-201ENST00000237186 MICAL1Q8TDZ2 1067 aa16.17■□□□□ 0.18
UBE3D-201ENST00000237186 ZNF512Q96ME7 567 aaPredicted RBP16.17■□□□□ 0.18
UBE3D-201ENST00000237186 PRICKLE1Q96MT3 831 aaPredicted RBP16.17■□□□□ 0.18
UBE3D-201ENST00000237186 CINPQ9BW66 212 aaPredicted RBP16.17■□□□□ 0.18
UBE3D-201ENST00000237186 WDR41Q9HAD4 459 aa16.17■□□□□ 0.18
UBE3D-201ENST00000237186 ADAMTS6Q9UKP5 1117 aa16.17■□□□□ 0.18
UBE3D-201ENST00000237186 A0A1B0GVM2 712 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 UBDO15205 165 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 STC2O76061 302 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 ABLIM3O94929 683 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 RGRP47804 291 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 ATP4BP51164 291 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 STX5Q13190 355 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 ART3Q13508 389 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 CYTH1Q15438 398 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 UGT3A2Q3SY77 523 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 CYHR1Q6ZMK1 362 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 LARP4Q71RC2 724 aaKnown RBP eCLIP16.16■□□□□ 0.18
UBE3D-201ENST00000237186 PDSS2Q86YH6 399 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 DENND1CQ8IV53 801 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 CLYBLQ8N0X4 340 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 ATOH8Q96SQ7 321 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 SPON2Q9BUD6 331 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 TDRD1Q9BXT4 1180 aaKnown RBP16.16■□□□□ 0.18
UBE3D-201ENST00000237186 NACA2Q9H009 215 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 SYTL2Q9HCH5 934 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 SARDHQ9UL12 918 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 SPO11Q9Y5K1 396 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 ACTL7AQ9Y615 435 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.16■□□□□ 0.18
UBE3D-201ENST00000237186 MAGEA13PA6NCF6 341 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 SKAP2O75563 359 aaPredicted RBP16.16■□□□□ 0.18
UBE3D-201ENST00000237186 SUPT7LO94864 414 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 MTHFD2P13995 350 aa16.16■□□□□ 0.18
UBE3D-201ENST00000237186 CD9P21926 228 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms