RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 EBF3Q9H4W6 596 aa23.8■■□□□ 1.4
RRP9-201ENST00000232888 ZNF576Q9H609 170 aa23.8■■□□□ 1.4
RRP9-201ENST00000232888 POLR3BQ9NW08 1133 aaPredicted RBP23.8■■□□□ 1.4
RRP9-201ENST00000232888 SIRPGQ9P1W8 387 aa23.8■■□□□ 1.4
RRP9-201ENST00000232888 MARCH4Q9P2E8 410 aaPredicted RBP23.8■■□□□ 1.4
RRP9-201ENST00000232888 DEC1Q9P2X7 70 aa23.8■■□□□ 1.4
RRP9-201ENST00000232888 STARD13Q9Y3M8 1113 aa23.8■■□□□ 1.4
RRP9-201ENST00000232888 MYOFQ9NZM1 2061 aa23.8■■□□□ 1.4
RRP9-201ENST00000232888 CCL22O00626 93 aa23.79■■□□□ 1.4
RRP9-201ENST00000232888 PROCP04070 461 aa23.79■■□□□ 1.4
RRP9-201ENST00000232888 NEFHP12036 1026 aa23.79■■□□□ 1.4
RRP9-201ENST00000232888 PMLP29590 882 aa23.79■■□□□ 1.4
RRP9-201ENST00000232888 PTPN5P54829 565 aa23.79■■□□□ 1.4
RRP9-201ENST00000232888 POLR2LP62875 67 aaKnown RBP23.79■■□□□ 1.4
RRP9-201ENST00000232888 PTPRCAPQ14761 206 aa23.79■■□□□ 1.4
RRP9-201ENST00000232888 ATG16L1Q676U5 607 aa23.79■■□□□ 1.4
RRP9-201ENST00000232888 MICALCLQ6ZW33 695 aa23.79■■□□□ 1.4
RRP9-201ENST00000232888 NUDCD3Q8IVD9 361 aa23.79■■□□□ 1.4
RRP9-201ENST00000232888 SLC41A1Q8IVJ1 513 aa23.79■■□□□ 1.4
RRP9-201ENST00000232888 GPATCH11Q8N954 259 aa23.79■■□□□ 1.4
RRP9-201ENST00000232888 ACVR1CQ8NER5 493 aa23.79■■□□□ 1.4
RRP9-201ENST00000232888 OR2A12Q8NGT7 310 aa23.79■■□□□ 1.4
RRP9-201ENST00000232888 VOPP1Q96AW1 172 aa23.79■■□□□ 1.4
RRP9-201ENST00000232888 ELSPBP1Q96BH3 223 aa23.79■■□□□ 1.4
RRP9-201ENST00000232888 OMDQ99983 421 aa23.79■■□□□ 1.4
RRP9-201ENST00000232888 HEPHQ9BQS7 1158 aa23.79■■□□□ 1.4
RRP9-201ENST00000232888 CLEC1BQ9P126 229 aa23.79■■□□□ 1.4
RRP9-201ENST00000232888 EMCNQ9ULC0 261 aa23.79■■□□□ 1.4
RRP9-201ENST00000232888 ANKRD36A6QL64 1941 aa23.79■■□□□ 1.4
RRP9-201ENST00000232888 WDR91A4D1P6 747 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 OR51F1A6NGY5 319 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 EDF1O60869 148 aaKnown RBP23.78■■□□□ 1.4
RRP9-201ENST00000232888 SLC35E2BP0CK96 405 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 SLC26A3P40879 764 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 MTHFRP42898 656 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 KPNA2P52292 529 aaKnown RBP23.78■■□□□ 1.4
RRP9-201ENST00000232888 ST8SIA6P61647 398 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 TSNAXIP1Q2TAA8 658 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 GAB4Q2WGN9 574 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 FAM45BPQ6NSW5 357 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 VITQ6UXI7 678 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 USP45Q70EL2 814 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 YAF2Q8IY57 180 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 ANKS4BQ8N8V4 417 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 CCDC197Q8NCU1 140 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 FAM45AQ8TCE6 357 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 HCAR2Q8TDS4 363 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 SCRN2Q96FV2 425 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 CIPCQ9C0C6 399 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 ZFYVE1Q9HBF4 777 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 ELOVL2Q9NXB9 296 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 VWA7Q9Y334 891 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 SNX3O60493 162 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 F7P08709 466 aaPredicted RBP23.78■■□□□ 1.4
RRP9-201ENST00000232888 CTPS1P17812 591 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 NFKBIAP25963 317 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 GKP32189 559 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 TAS2R39P59534 338 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 ITIH4Q14624 930 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 CTC1Q2NKJ3 1217 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 BRAT1Q6PJG6 821 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 GDPD4Q6W3E5 623 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 Q6ZVU0 165 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 LYSMD3Q7Z3D4 306 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 CBARPQ8N350 705 aaPredicted RBP23.78■■□□□ 1.4
RRP9-201ENST00000232888 CCDC63Q8NA47 563 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 RDH11Q8TC12 318 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 MCCC1Q96RQ3 725 aaPredicted RBP23.78■■□□□ 1.4
RRP9-201ENST00000232888 ELAC2Q9BQ52 826 aaKnown RBP23.78■■□□□ 1.4
RRP9-201ENST00000232888 OSBPL1AQ9BXW6 950 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 ZDHHC6Q9H6R6 413 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 HPS4Q9NQG7 708 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 TMEM216Q9P0N5 145 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 PLA2G4CQ9UP65 541 aa23.78■■□□□ 1.4
RRP9-201ENST00000232888 TRIM24O15164 1050 aa23.77■■□□□ 1.4
RRP9-201ENST00000232888 HNF1BP35680 557 aa23.77■■□□□ 1.4
RRP9-201ENST00000232888 TTPAP49638 278 aa23.77■■□□□ 1.4
RRP9-201ENST00000232888 CDKN3Q16667 212 aa23.77■■□□□ 1.4
RRP9-201ENST00000232888 PREPLQ4J6C6 727 aaPredicted RBP23.77■■□□□ 1.4
RRP9-201ENST00000232888 ZNF789Q5FWF6 425 aa23.77■■□□□ 1.4
RRP9-201ENST00000232888 HECTD2Q5U5R9 776 aa23.77■■□□□ 1.4
RRP9-201ENST00000232888 TPRG1Q6ZUI0 275 aa23.77■■□□□ 1.4
RRP9-201ENST00000232888 C12orf40Q86WS4 652 aa23.77■■□□□ 1.4
RRP9-201ENST00000232888 TTC8Q8TAM2 541 aa23.77■■□□□ 1.4
RRP9-201ENST00000232888 ZFYVE19Q96K21 471 aa23.77■■□□□ 1.4
RRP9-201ENST00000232888 SMIM14Q96QK8 99 aa23.77■■□□□ 1.4
RRP9-201ENST00000232888 PLCD4Q9BRC7 762 aa23.77■■□□□ 1.4
RRP9-201ENST00000232888 C1QTNF1Q9BXJ1 281 aa23.77■■□□□ 1.4
RRP9-201ENST00000232888 NMRAL1Q9HBL8 299 aa23.77■■□□□ 1.4
RRP9-201ENST00000232888 POPDC3Q9HBV1 291 aa23.77■■□□□ 1.4
RRP9-201ENST00000232888 FKBPLQ9UIM3 349 aa23.77■■□□□ 1.4
RRP9-201ENST00000232888 ALPIP09923 528 aa23.76■■□□□ 1.39
RRP9-201ENST00000232888 PSMC3P17980 439 aa23.76■■□□□ 1.39
RRP9-201ENST00000232888 SAT1P21673 171 aa23.76■■□□□ 1.39
RRP9-201ENST00000232888 MC4RP32245 332 aa23.76■■□□□ 1.39
RRP9-201ENST00000232888 RUNX3Q13761 415 aa23.76■■□□□ 1.39
RRP9-201ENST00000232888 PTPRNQ16849 979 aa23.76■■□□□ 1.39
RRP9-201ENST00000232888 CERS6Q6ZMG9 384 aa23.76■■□□□ 1.39
RRP9-201ENST00000232888 CYB5D2Q8WUJ1 264 aa23.76■■□□□ 1.39
RRP9-201ENST00000232888 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms