RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 COQ10BQ9H8M1 238 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 FAM49BQ9NUQ9 324 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 DSEQ9UL01 958 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 SPTBN5Q9NRC6 3674 aaKnown RBP20.61■□□□□ 0.89
SNX3-201ENST00000230085 HEATR9A2RTY3 570 aa20.61■□□□□ 0.89
SNX3-201ENST00000230085 HCRTO43612 131 aa20.61■□□□□ 0.89
SNX3-201ENST00000230085 NAGLUP54802 743 aa20.61■□□□□ 0.89
SNX3-201ENST00000230085 GRM3Q14832 879 aa20.61■□□□□ 0.89
SNX3-201ENST00000230085 NHSL2Q5HYW2 709 aa20.61■□□□□ 0.89
SNX3-201ENST00000230085 PDE12Q6L8Q7 609 aaKnown RBP20.61■□□□□ 0.89
SNX3-201ENST00000230085 LRRC8EQ6NSJ5 796 aa20.61■□□□□ 0.89
SNX3-201ENST00000230085 CES3Q6UWW8 571 aa20.61■□□□□ 0.89
SNX3-201ENST00000230085 ADGRD2Q7Z7M1 963 aa20.61■□□□□ 0.89
SNX3-201ENST00000230085 METTL23Q86XA0 190 aa20.61■□□□□ 0.89
SNX3-201ENST00000230085 TRIML2Q8N7C3 387 aa20.61■□□□□ 0.89
SNX3-201ENST00000230085 TERB1Q8NA31 727 aa20.61■□□□□ 0.89
SNX3-201ENST00000230085 ZUFSPQ96AP4 578 aa20.61■□□□□ 0.89
SNX3-201ENST00000230085 GUCD1Q96NT3 240 aa20.61■□□□□ 0.89
SNX3-201ENST00000230085 DOK1Q99704 481 aa20.61■□□□□ 0.89
SNX3-201ENST00000230085 RTP3Q9BQQ7 232 aa20.61■□□□□ 0.89
SNX3-201ENST00000230085 CAB39LQ9H9S4 337 aa20.61■□□□□ 0.89
SNX3-201ENST00000230085 MEAF6Q9HAF1 191 aa20.61■□□□□ 0.89
SNX3-201ENST00000230085 CACNA2D2Q9NY47 1150 aa20.61■□□□□ 0.89
SNX3-201ENST00000230085 NCKIPSDQ9NZQ3 722 aa20.61■□□□□ 0.89
SNX3-201ENST00000230085 KLHL8Q9P2G9 620 aaPredicted RBP20.61■□□□□ 0.89
SNX3-201ENST00000230085 MTCH2Q9Y6C9 303 aa20.61■□□□□ 0.89
SNX3-201ENST00000230085 NEMP1O14524 444 aa20.6■□□□□ 0.89
SNX3-201ENST00000230085 GABRDO14764 452 aa20.6■□□□□ 0.89
SNX3-201ENST00000230085 DLX3O60479 287 aa20.6■□□□□ 0.89
SNX3-201ENST00000230085 CLASP2O75122 1294 aaKnown RBP20.6■□□□□ 0.89
SNX3-201ENST00000230085 CNPP09543 421 aaKnown RBP20.6■□□□□ 0.89
SNX3-201ENST00000230085 LMO2P25791 158 aa20.6■□□□□ 0.89
SNX3-201ENST00000230085 SPIDRQ14159 915 aa20.6■□□□□ 0.89
SNX3-201ENST00000230085 ZBED5Q49AG3 693 aa20.6■□□□□ 0.89
SNX3-201ENST00000230085 CTXN3Q4LDR2 81 aa20.6■□□□□ 0.89
SNX3-201ENST00000230085 SAMD4BQ5PRF9 694 aaKnown RBP20.6■□□□□ 0.89
SNX3-201ENST00000230085 ACBD5Q5T8D3 534 aaPredicted RBP20.6■□□□□ 0.89
SNX3-201ENST00000230085 LINC00523Q86TU6 105 aa20.6■□□□□ 0.89
SNX3-201ENST00000230085 RBM23Q86U06 439 aaKnown RBP20.6■□□□□ 0.89
SNX3-201ENST00000230085 TRIM74Q86UV6 250 aa20.6■□□□□ 0.89
SNX3-201ENST00000230085 TRIM73Q86UV7 250 aa20.6■□□□□ 0.89
SNX3-201ENST00000230085 OSTM1Q86WC4 334 aa20.6■□□□□ 0.89
SNX3-201ENST00000230085 TMEM86AQ8N2M4 240 aa20.6■□□□□ 0.89
SNX3-201ENST00000230085 FSTL5Q8N475 847 aaPredicted RBP20.6■□□□□ 0.89
SNX3-201ENST00000230085 GALNT4Q8N4A0 578 aa20.6■□□□□ 0.89
SNX3-201ENST00000230085 TNIP2Q8NFZ5 429 aa20.6■□□□□ 0.89
SNX3-201ENST00000230085 ZNF420Q8TAQ5 688 aaPredicted RBP20.6■□□□□ 0.89
SNX3-201ENST00000230085 PTCD2Q8WV60 388 aaKnown RBP20.6■□□□□ 0.89
SNX3-201ENST00000230085 MYLIPQ8WY64 445 aa20.6■□□□□ 0.89
SNX3-201ENST00000230085 KCTD13Q8WZ19 329 aa20.6■□□□□ 0.89
SNX3-201ENST00000230085 TFAP2CQ92754 450 aa20.6■□□□□ 0.89
SNX3-201ENST00000230085 PBXIP1Q96AQ6 731 aa20.6■□□□□ 0.89
SNX3-201ENST00000230085 SLCO4A1Q96BD0 722 aa20.6■□□□□ 0.89
SNX3-201ENST00000230085 CCDC126Q96EE4 140 aa20.6■□□□□ 0.89
SNX3-201ENST00000230085 GAS2L1Q99501 681 aaPredicted RBP20.6■□□□□ 0.89
SNX3-201ENST00000230085 CLSTN3Q9BQT9 956 aa20.6■□□□□ 0.89
SNX3-201ENST00000230085 MLPHQ9BV36 600 aaPredicted RBP20.6■□□□□ 0.89
SNX3-201ENST00000230085 SPAG4Q9NPE6 437 aa20.6■□□□□ 0.89
SNX3-201ENST00000230085 TMEM181Q9P2C4 612 aa20.6■□□□□ 0.89
SNX3-201ENST00000230085 STAP1Q9ULZ2 295 aa20.6■□□□□ 0.89
SNX3-201ENST00000230085 A0A087WXM4 84 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 PER2O15055 1255 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 TEX28O15482 410 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 ADAM12O43184 909 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 TBC1D4O60343 1298 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 PTPN1P18031 435 aaKnown RBP20.59■□□□□ 0.89
SNX3-201ENST00000230085 SULT1E1P49888 294 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 BSPRYQ5W0U4 402 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 KLHL35Q6PF15 583 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 LPCAT2Q7L5N7 544 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 FAM131BQ86XD5 332 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 AFAP1L2Q8N4X5 818 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 OR6B3Q8NGW1 331 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 USP13Q92995 863 aaPredicted RBP20.59■□□□□ 0.89
SNX3-201ENST00000230085 ATP6V1E2Q96A05 226 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 MFSD3Q96ES6 412 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 CNDP2Q96KP4 475 aaKnown RBP20.59■□□□□ 0.89
SNX3-201ENST00000230085 MRPL57Q9BQC6 102 aaKnown RBP20.59■□□□□ 0.89
SNX3-201ENST00000230085 OSBPL6Q9BZF3 934 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 MRPL46Q9H2W6 279 aaKnown RBP20.59■□□□□ 0.89
SNX3-201ENST00000230085 C20orf96Q9NUD7 363 aaPredicted RBP20.59■□□□□ 0.89
SNX3-201ENST00000230085 PIH1D1Q9NWS0 290 aaKnown RBP20.59■□□□□ 0.89
SNX3-201ENST00000230085 DUS2Q9NX74 493 aaKnown RBP20.59■□□□□ 0.89
SNX3-201ENST00000230085 MTRRQ9UBK8 725 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 PACSIN3Q9UKS6 424 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 ACOT9Q9Y305 439 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 COL6A3P12111 3177 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 A0A087X1B8 175 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 CFLARO15519 480 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 HTRA2O43464 458 aaPredicted RBP20.59■□□□□ 0.89
SNX3-201ENST00000230085 FAM163BP0C2L3 166 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 GALNT2Q10471 571 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 CDH17Q12864 832 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 ZBTB17Q13105 803 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 TMEM198Q66K66 360 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 NAPEPLDQ6IQ20 393 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 ZNF280DQ6N043 979 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 GPR65Q8IYL9 337 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 DEFB106AQ8N104 65 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 OR10T2Q8NGX3 314 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms