RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 RAB10P61026 200 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 LSM3P62310 102 aaKnown RBP9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 SCAPQ12770 1279 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 DUSP28Q4G0W2 176 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 TIGD2Q4W5G0 525 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 RBM20Q5T481 1227 aaKnown RBP9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 DENND5AQ6IQ26 1287 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 VASH1Q7L8A9 365 aaPredicted RBP9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 BHLHA9Q7RTU4 235 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 ZC3H7AQ8IWR0 971 aaKnown RBP9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 GPRC5AQ8NFJ5 357 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 HTRA1Q92743 480 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 RNF38Q9H0F5 515 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 POMKQ9H5K3 350 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 ZNF696Q9H7X3 374 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 GABRDO14764 452 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 NCAM2O15394 837 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 PMPCBO75439 489 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 ENO2P09104 434 aaPredicted RBP9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 STMN1P16949 149 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 ARCN1P48444 511 aaKnown RBP9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 RAD23AP54725 363 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 NKX3-2P78367 333 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 PTK2BQ14289 1009 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 FRG1Q14331 258 aaKnown RBP9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 CSHL1Q14406 222 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 PLCL1Q15111 1095 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 ZNF829Q3KNS6 432 aaPredicted RBP9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 PPP2R2DQ66LE6 453 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 NAPEPLDQ6IQ20 393 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 PKN3Q6P5Z2 889 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 FAM35AQ86V20 835 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 TOP6BLQ8N6T0 577 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 C3orf58Q8NDZ4 430 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 FAM110BQ8TC76 370 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 ELMO2Q96JJ3 720 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 SENP8Q96LD8 212 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 PAAF1Q9BRP4 392 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 FICDQ9BVA6 458 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 IL1RL2Q9HB29 575 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 CCDC167Q9P0B6 97 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 PCDHGA7Q9Y5G6 932 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 TIPRLO75663 272 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 APOA4P06727 396 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 TPD52P55327 224 aaPredicted RBP9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 XKR4Q5GH76 650 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 DPP9Q86TI2 863 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 OR9I1Q8NGQ6 314 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 RDH11Q8TC12 318 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 IRGQQ8WZA9 623 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 RNF34Q969K3 372 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 SLC39A3Q9BRY0 314 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 SOX17Q9H6I2 414 aaPredicted RBP9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 ANKRD6Q9Y2G4 727 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 RNF11Q9Y3C5 154 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 ATP6AP2A0A1C7CYW4 349 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 PFDN6O15212 129 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 TADA2AO75478 443 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 ATP6AP2O75787 350 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 MFN2O95140 757 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 ZNF12P17014 697 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 ZNF26P17031 533 aaPredicted RBP9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 HCAR3P49019 387 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 PSME3P61289 254 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 MGAT5BQ3V5L5 792 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 PITRM1Q5JRX3 1037 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 ZNF470Q6ECI4 717 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 TAC4Q86UU9 113 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 ADCY4Q8NFM4 1077 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 SPPL2BQ8TCT7 592 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 SH3RF2Q8TEC5 729 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 PHF21BQ96EK2 531 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 TBL1YQ9BQ87 522 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 CLK4Q9HAZ1 481 aaKnown RBP9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 PARVBQ9HBI1 364 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 ADARB2Q9NS39 739 aaKnown RBP9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 DKK3Q9UBP4 350 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 VTI1BQ9UEU0 232 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 MID2Q9UJV3 735 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 VPS28Q9UK41 221 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 NUDT5Q9UKK9 219 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 HHLA1C9JL84 531 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 MAN1A2O60476 641 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 GNAO1P09471 354 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 OCA2Q04671 838 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 ARL13BQ3SXY8 428 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 PAN2Q504Q3 1202 aaKnown RBP9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 PCID2Q5JVF3 399 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 TWF2Q6IBS0 349 aaKnown RBP9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 ZFP1Q6P2D0 407 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 PRR23CQ6ZRP0 262 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 DEPDC4Q8N2C3 294 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 PSD4Q8NDX1 1056 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 SHCBP1Q8NEM2 672 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 CALML6Q8TD86 181 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 OLFM1Q99784 485 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 SLC29A1Q99808 456 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 CCDC90BQ9GZT6 254 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 ADNPQ9H2P0 1102 aa9.42□□□□□ -0.9
HLA-DOA-201ENST00000229829 CARD8Q9Y2G2 431 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms