RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 ZNF132P52740 706 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 MBTD1Q05BQ5 628 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 TIMM50Q3ZCQ8 353 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 OR52E6Q96RD3 313 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 DUSP9Q99956 384 aaKnown RBP13.26□□□□□ -0.29
COL1A1-201ENST00000225964 FUT8Q9BYC5 575 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 ACP6Q9NPH0 428 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 LRRIQ1Q96JM4 1722 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 YDJCA8MPS7 323 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 ERCC2P18074 760 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 PTPN5P54829 565 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 SMU1Q2TAY7 513 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 FKBP1CQ5VVH2 108 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 POLNQ7Z5Q5 900 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 CDH24Q86UP0 819 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 ZNF540Q8NDQ6 660 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 MMADHCQ9H3L0 296 aaPredicted RBP13.25□□□□□ -0.29
COL1A1-201ENST00000225964 KCNK4Q9NYG8 393 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 GPC6Q9Y625 555 aaPredicted RBP13.25□□□□□ -0.29
COL1A1-201ENST00000225964 UBE2QL1A1L167 161 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 IFNGP01579 166 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 CES1P23141 567 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 C9orf64Q5T6V5 341 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 TAPT1Q6NXT6 567 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 KCNK18Q7Z418 384 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 TOP6BLQ8N6T0 577 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 EMID1Q96A84 441 aaPredicted RBP13.25□□□□□ -0.29
COL1A1-201ENST00000225964 COPS8Q99627 209 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 RASSF1Q9NS23 344 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 EFR3BQ9Y2G0 817 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 ATG13O75143 517 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 PSMD10O75832 226 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 NFATC1O95644 943 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 OR4Q2P0C623 313 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 CDH5P33151 784 aaPredicted RBP13.25□□□□□ -0.29
COL1A1-201ENST00000225964 CASP5P51878 434 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 ZNF844Q08AG5 666 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 ARHGAP36Q6ZRI8 547 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 TTC29Q8NA56 475 aaPredicted RBP13.25□□□□□ -0.29
COL1A1-201ENST00000225964 PJA1Q8NG27 643 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 PMEPA1Q969W9 287 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 AIF1LQ9BQI0 150 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 BHLHE41Q9C0J9 482 aaPredicted RBP13.25□□□□□ -0.29
COL1A1-201ENST00000225964 DEC1Q9P2X7 70 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 BTBD3Q9Y2F9 522 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 DIP2CQ9Y2E4 1556 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 STX16-NPEPL1H3BU86 382 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 STX16O14662 325 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 SCAMP1O15126 338 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 SELPP16109 830 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 ACADLP28330 430 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 CBFBQ13951 182 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 ATAT1Q5SQI0 421 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 LIN54Q6MZP7 749 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 VSIG10LQ86VR7 867 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 PPTC7Q8NI37 304 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 AP2M1Q96CW1 435 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 PRDM8Q9NQV8 689 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 ARHGDIBP52566 201 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 NAGLUP54802 743 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 GALNT13Q8IUC8 556 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 PARP8Q8N3A8 854 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 AADATQ8N5Z0 425 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 ARNTL2Q8WYA1 636 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 MARK1Q9P0L2 795 aa13.25□□□□□ -0.29
COL1A1-201ENST00000225964 STBD1O95210 358 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 DDR1Q08345 913 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 ANKS1BQ7Z6G8 1248 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 DEPDC4Q8N2C3 294 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 HEXDCQ8WVB3 486 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 SLC4A9Q96Q91 983 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 CIDEBQ9UHD4 219 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 PTCH2Q9Y6C5 1203 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 FAM237BA0A1B0GVD1 139 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 GRM5P41594 1212 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 NAA20P61599 178 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 CAPN13Q6MZZ7 669 aaPredicted RBP13.24□□□□□ -0.29
COL1A1-201ENST00000225964 GPR180Q86V85 440 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 ATCAYQ86WG3 371 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 BEND7Q8N7W2 519 aaPredicted RBP13.24□□□□□ -0.29
COL1A1-201ENST00000225964 ZNF483Q8TF39 744 aaPredicted RBP13.24□□□□□ -0.29
COL1A1-201ENST00000225964 LGMNQ99538 433 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 ERGIC3Q9Y282 383 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 ACTL7BQ9Y614 415 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 CASP9P55211 416 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 CCNYL2Q5T2Q4 361 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 SPESP1Q6UW49 350 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 TSHZ1Q6ZSZ6 1077 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 UBR7Q8N806 425 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 PMM1Q92871 262 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 FCRL2Q96LA5 508 aaPredicted RBP13.24□□□□□ -0.29
COL1A1-201ENST00000225964 ANKZF1Q9H8Y5 726 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 GDF3Q9NR23 364 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 GLYATL1P3A0A0U1RQE8 302 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 COX4I1P13073 169 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 ARFIP1P53367 373 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 CDK18Q07002 472 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 UBAP2LQ14157 1087 aaKnown RBP13.24□□□□□ -0.29
COL1A1-201ENST00000225964 KCNA10Q16322 511 aa13.24□□□□□ -0.29
COL1A1-201ENST00000225964 PPP1R15BQ5SWA1 713 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms