RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 KCNN4O15554 427 aa12.69□□□□□ -0.38
LSM5-201ENST00000223084 CBFA2T3O75081 653 aa12.69□□□□□ -0.38
LSM5-201ENST00000223084 CLDN7O95471 211 aa12.69□□□□□ -0.38
LSM5-201ENST00000223084 C1SP09871 688 aa12.69□□□□□ -0.38
LSM5-201ENST00000223084 PIRTP0C851 137 aa12.69□□□□□ -0.38
LSM5-201ENST00000223084 CEACAM1P13688 526 aa12.69□□□□□ -0.38
LSM5-201ENST00000223084 THOP1P52888 689 aa12.69□□□□□ -0.38
LSM5-201ENST00000223084 RPL26P61254 145 aaKnown RBP12.69□□□□□ -0.38
LSM5-201ENST00000223084 PTSQ03393 145 aa12.69□□□□□ -0.38
LSM5-201ENST00000223084 EIF2B5Q13144 721 aaKnown RBP12.69□□□□□ -0.38
LSM5-201ENST00000223084 KLF1Q13351 362 aaPredicted RBP12.69□□□□□ -0.38
LSM5-201ENST00000223084 SEL1L2Q5TEA6 688 aa12.69□□□□□ -0.38
LSM5-201ENST00000223084 Q6ZVL8 140 aa12.69□□□□□ -0.38
LSM5-201ENST00000223084 KANSL1Q7Z3B3 1105 aa12.69□□□□□ -0.38
LSM5-201ENST00000223084 DCP2Q8IU60 420 aaKnown RBP12.69□□□□□ -0.38
LSM5-201ENST00000223084 CDKL3Q8IVW4 592 aaPredicted RBP12.69□□□□□ -0.38
LSM5-201ENST00000223084 NUS1Q96E22 293 aa12.69□□□□□ -0.38
LSM5-201ENST00000223084 OXNAD1Q96HP4 312 aaPredicted RBP12.69□□□□□ -0.38
LSM5-201ENST00000223084 PDLIM2Q96JY6 352 aa12.69□□□□□ -0.38
LSM5-201ENST00000223084 TRIB3Q96RU7 358 aa12.69□□□□□ -0.38
LSM5-201ENST00000223084 VAT1Q99536 393 aa12.69□□□□□ -0.38
LSM5-201ENST00000223084 APOOQ9BUR5 198 aa12.69□□□□□ -0.38
LSM5-201ENST00000223084 USP29Q9HBJ7 922 aa12.69□□□□□ -0.38
LSM5-201ENST00000223084 UCKL1Q9NWZ5 548 aa12.69□□□□□ -0.38
LSM5-201ENST00000223084 FAM153AQ9UHL3 310 aa12.69□□□□□ -0.38
LSM5-201ENST00000223084 RSPH14Q9UHP6 348 aa12.69□□□□□ -0.38
LSM5-201ENST00000223084 CD84Q9UIB8 345 aa12.69□□□□□ -0.38
LSM5-201ENST00000223084 KLF15Q9UIH9 416 aa12.69□□□□□ -0.38
LSM5-201ENST00000223084 PCOLCE2Q9UKZ9 415 aa12.69□□□□□ -0.38
LSM5-201ENST00000223084 RPL26L1Q9UNX3 145 aaKnown RBP12.69□□□□□ -0.38
LSM5-201ENST00000223084 KMT2BQ9UMN6 2715 aaPredicted RBP12.69□□□□□ -0.38
LSM5-201ENST00000223084 CHD8Q9HCK8 2581 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 GOLGA6CA6NDK9 693 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 GOLGA6BA6NDN3 693 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 ANKRD66B4E2M5 251 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 YKT6O15498 198 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 FLRT2O43155 660 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 GOLGA6DP0CG33 693 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 WNT3AP56704 352 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 CDK18Q07002 472 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 MTM1Q13496 603 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 TRIP6Q15654 476 aaKnown RBP12.68□□□□□ -0.38
LSM5-201ENST00000223084 CDKN3Q16667 212 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 PNCKQ6P2M8 343 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 KDELC1Q6UW63 502 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 TECPR1Q7Z6L1 1165 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 PARGQ86W56 976 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 SLC13A5Q86YT5 568 aaPredicted RBP12.68□□□□□ -0.38
LSM5-201ENST00000223084 REXO1L1PQ8IX06 675 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 RBFAQ8N0V3 343 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 EID2Q8N6I1 236 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 TTC13Q8NBP0 860 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 CCDC110Q8TBZ0 833 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 ATG4AQ8WYN0 398 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 DTD2Q96FN9 168 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 IFT43Q96FT9 208 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 FCRL5Q96RD9 977 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 GORASP1Q9BQQ3 440 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 MLPHQ9BV36 600 aaPredicted RBP12.68□□□□□ -0.38
LSM5-201ENST00000223084 TLR10Q9BXR5 811 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 ADGRE3Q9BY15 652 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 TCEAL2Q9H3H9 227 aaPredicted RBP12.68□□□□□ -0.38
LSM5-201ENST00000223084 TRMT1Q9NXH9 659 aaKnown RBP12.68□□□□□ -0.38
LSM5-201ENST00000223084 GOLGA6AQ9NYA3 693 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 TRHDEQ9UKU6 1024 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 NCOR2Q9Y618 2525 aa12.68□□□□□ -0.38
LSM5-201ENST00000223084 C1orf232A0A0U1RR37 186 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 PSMD11O00231 422 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 SCAMP1O15126 338 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 FFAR2O15552 330 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 PIAS2O75928 621 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 NDST3O95803 873 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 SLC4A1P02730 911 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 CSF2P04141 144 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 JUNDP17535 347 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 DGKAP23743 735 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 PSMB4P28070 264 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 GRK6P43250 576 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 CHRNA4P43681 627 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 STC1P52823 247 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 YPEL5P62699 121 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 SIM1P81133 766 aaPredicted RBP12.67□□□□□ -0.38
LSM5-201ENST00000223084 PTK2BQ14289 1009 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 GSE1Q14687 1217 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 NFATC4Q14934 902 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 SLC14A2Q15849 920 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 ANKRD20A2Q5SQ80 823 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 ANKRD20A1Q5TYW2 823 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 ANKRD20A3Q5VUR7 823 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 KCTD16Q68DU8 428 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 ESRP1Q6NXG1 681 aaKnown RBP12.67□□□□□ -0.38
LSM5-201ENST00000223084 ENPP7Q6UWV6 458 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 SLC25A45Q8N413 288 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 SLC25A41Q8N5S1 370 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 FAM71DQ8N9W8 422 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 IPMKQ8NFU5 416 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 TRIM58Q8NG06 486 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 SLC35B2Q8TB61 432 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 BAHD1Q8TBE0 780 aaPredicted RBP12.67□□□□□ -0.38
LSM5-201ENST00000223084 SCAMP4Q969E2 229 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms