RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 TWIST2Q8WVJ9 160 aa17.22■□□□□ 0.35
H2AFV-201ENST00000222690 MAML3Q96JK9 1138 aa17.22■□□□□ 0.35
H2AFV-201ENST00000222690 NAA50Q9GZZ1 169 aaKnown RBP17.22■□□□□ 0.35
H2AFV-201ENST00000222690 GSTO2Q9H4Y5 243 aa17.22■□□□□ 0.35
H2AFV-201ENST00000222690 CATSPERBQ9H7T0 1116 aa17.22■□□□□ 0.35
H2AFV-201ENST00000222690 PLGRKTQ9HBL7 147 aa17.22■□□□□ 0.35
H2AFV-201ENST00000222690 CD300AQ9UGN4 299 aa17.22■□□□□ 0.35
H2AFV-201ENST00000222690 SUPT3HB4E1H0 165 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 MATN3O15232 486 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 PCNAP12004 261 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 DNAJB2P25686 324 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 ALDH3B2P48448 385 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 ARSDP51689 593 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 DNAJB13P59910 316 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 PSMD5Q16401 504 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 KIAA0930Q6ICG6 404 aaPredicted RBP17.21■□□□□ 0.35
H2AFV-201ENST00000222690 MTG1Q9BT17 334 aaPredicted RBP17.21■□□□□ 0.35
H2AFV-201ENST00000222690 C1orf50Q9BV19 199 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 ADNPQ9H2P0 1102 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 TMEM165Q9HC07 324 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 MARCH4Q9P2E8 410 aaPredicted RBP17.21■□□□□ 0.35
H2AFV-201ENST00000222690 FAM50BQ9Y247 325 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 DNAJC15Q9Y5T4 150 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 MAP4P27816 1152 aaKnown RBP17.21■□□□□ 0.35
H2AFV-201ENST00000222690 DIO3P55073 304 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 DSC2Q02487 901 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 TRAF2Q12933 501 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 BNIP3Q12983 259 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 ZNF554Q86TJ5 538 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 SLC15A3Q8IY34 581 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 CMTR2Q8IYT2 770 aaKnown RBP17.21■□□□□ 0.35
H2AFV-201ENST00000222690 CLYBLQ8N0X4 340 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 LRRC43Q8N309 656 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 DHRSXQ8N5I4 330 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 NAT16Q8N8M0 369 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 FNDC8Q8TC99 324 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 ESAMQ96AP7 390 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 ING2Q9H160 280 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 TBC1D23Q9NUY8 699 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 TBC1D13Q9NVG8 400 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 CLCN5P51795 746 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 USP41Q3LFD5 358 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 ARHGAP12Q8IWW6 846 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 SMG8Q8ND04 991 aaKnown RBP17.21■□□□□ 0.35
H2AFV-201ENST00000222690 HM13Q8TCT9 377 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 TOP1MTQ969P6 601 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 GFM2Q969S9 779 aaKnown RBP17.21■□□□□ 0.35
H2AFV-201ENST00000222690 TBATAQ96M53 351 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 RNF145Q96MT1 663 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 TMEM74Q96NL1 305 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 MUC3BQ9H195 1237 aa17.21■□□□□ 0.35
H2AFV-201ENST00000222690 ATE1O95260 518 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 SCNN1GP51170 649 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 BEX3Q00994 111 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 PMS2P3Q13401 168 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 ACAP2Q15057 778 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 FGD3Q5JSP0 725 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 CNTN4Q8IWV2 1026 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 ERLEC1Q96DZ1 483 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 COMMD10Q9Y6G5 202 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 ARPC2O15144 300 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 KCNE1P15382 129 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 IMPDH1P20839 514 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 NR4A1P22736 598 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 LHX1P48742 406 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 ZNF678Q5SXM1 525 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 BNIPLQ7Z465 357 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 EPHX4Q8IUS5 362 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 PLEKHG4BQ96PX9 1271 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 KCTD14Q9BQ13 255 aaPredicted RBP17.2■□□□□ 0.34
H2AFV-201ENST00000222690 C9orf16Q9BUW7 83 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 PRKD2Q9BZL6 878 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 SP110Q9HB58 689 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 GID8Q9NWU2 228 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 MAP10Q9P2G4 905 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 J3QRK9 145 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 ZNF189O75820 626 aaPredicted RBP17.2■□□□□ 0.34
H2AFV-201ENST00000222690 POMCP01189 267 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 BRCC3P46736 316 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 DUSP28Q4G0W2 176 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 UBXN11Q5T124 520 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 LARP4Q71RC2 724 aaKnown RBP eCLIP17.2■□□□□ 0.343e-7■■■□□ 18
H2AFV-201ENST00000222690 C3orf58Q8NDZ4 430 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 TNIP2Q8NFZ5 429 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 PTERQ96BW5 349 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 FBXL8Q96CD0 374 aa17.2■□□□□ 0.34
H2AFV-201ENST00000222690 AZIN1O14977 448 aa17.19■□□□□ 0.34
H2AFV-201ENST00000222690 B4GAT1O43505 415 aa17.19■□□□□ 0.34
H2AFV-201ENST00000222690 GRIK1P39086 918 aa17.19■□□□□ 0.34
H2AFV-201ENST00000222690 ZBED5Q49AG3 693 aa17.19■□□□□ 0.34
H2AFV-201ENST00000222690 SLC44A4Q53GD3 710 aa17.19■□□□□ 0.34
H2AFV-201ENST00000222690 UNC50Q53HI1 259 aa17.19■□□□□ 0.34
H2AFV-201ENST00000222690 SDHAF4Q5VUM1 108 aa17.19■□□□□ 0.34
H2AFV-201ENST00000222690 FAM45BPQ6NSW5 357 aa17.19■□□□□ 0.34
H2AFV-201ENST00000222690 TMEM207Q6UWW9 146 aa17.19■□□□□ 0.34
H2AFV-201ENST00000222690 KCTD8Q6ZWB6 473 aa17.19■□□□□ 0.34
H2AFV-201ENST00000222690 KLHL23Q8NBE8 558 aa17.19■□□□□ 0.34
H2AFV-201ENST00000222690 FAM45AQ8TCE6 357 aa17.19■□□□□ 0.34
H2AFV-201ENST00000222690 LZICQ8WZA0 190 aa17.19■□□□□ 0.34
H2AFV-201ENST00000222690 FAM210AQ96ND0 272 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms