RNA–Protein interactions for RNA: ENST00000080059.11

HDAC7-201, Transcript of histone deacetylase 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HDAC7, Length 4,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-201ENST00000080059 GATMP50440 423 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 ATP6V0D1P61421 351 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 RIPK1Q13546 671 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 CAMK2GQ13555 558 aaPredicted RBP13.13□□□□□ -0.31
HDAC7-201ENST00000080059 SLC30A9Q6PML9 568 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 C6orf89Q6UWU4 347 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 CDHR3Q6ZTQ4 885 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 RRM2BQ7LG56 351 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 RBM23Q86U06 439 aaKnown RBP13.13□□□□□ -0.31
HDAC7-201ENST00000080059 ZFYVE1Q9HBF4 777 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 C9JVG2 144 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 AHSGP02765 367 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 SLC18A1P54219 525 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 GALNT2Q10471 571 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 KHDC1Q4VXA5 237 aaKnown RBP13.13□□□□□ -0.31
HDAC7-201ENST00000080059 ERAP2Q6P179 960 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 FBXL19Q6PCT2 694 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 TRAPPC5Q8IUR0 188 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 OR10T2Q8NGX3 314 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 FCF1Q9Y324 198 aaKnown RBP13.13□□□□□ -0.31
HDAC7-201ENST00000080059 MBLAC1A4D2B0 266 aaPredicted RBP13.13□□□□□ -0.31
HDAC7-201ENST00000080059 E7ESA3 106 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 INSIG1O15503 277 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 ZSCAN9O15535 394 aaPredicted RBP13.13□□□□□ -0.31
HDAC7-201ENST00000080059 RASSF9O75901 435 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 SMNDC1O75940 238 aaKnown RBP eCLIP13.13□□□□□ -0.312e-6■■□□□ 12.6
HDAC7-201ENST00000080059 CLPTM1O96005 669 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 UGT2B4P06133 528 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 MAPK8P45983 427 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 HSPA13P48723 471 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 CDH4P55283 916 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 SLC18A2Q05940 514 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 GK5Q6ZS86 529 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 ADAMTSL2Q86TH1 951 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 RIN3Q8TB24 985 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 DPF3Q92784 378 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 THAP11Q96EK4 314 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 COPS8Q99627 209 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 TMEM79Q9BSE2 394 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 TNKS2Q9H2K2 1166 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 SMOC2Q9H3U7 446 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 RMND5AQ9H871 391 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 SLC12A4Q9UP95 1085 aa13.13□□□□□ -0.31
HDAC7-201ENST00000080059 TBC1D3BA6NDS4 549 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 TBC1D4O60343 1298 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 ZNF623O75123 536 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 EPB42P16452 691 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 PIK3CGP48736 1102 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 MAPKAPK2P49137 400 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 NEK3P51956 506 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 SEMG2Q02383 582 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 IRF8Q02556 426 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 KRT72Q14CN4 511 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 LSM12Q3MHD2 195 aaKnown RBP13.12□□□□□ -0.31
HDAC7-201ENST00000080059 PLPP4Q5VZY2 271 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 KIAA0930Q6ICG6 404 aaPredicted RBP13.12□□□□□ -0.31
HDAC7-201ENST00000080059 ZFP1Q6P2D0 407 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 C17orf99Q6UX52 265 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 ZYG11AQ6WRX3 759 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 GPRIN3Q6ZVF9 776 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 C14orf80Q86SX3 495 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 TRMOQ9BU70 441 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 ARHGEF3Q9NR81 526 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 ARL5AQ9Y689 179 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 PEX1O43933 1283 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 MGRN1O60291 552 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 ULK1O75385 1050 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 TM7SF2O76062 418 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 MLYCDO95822 493 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 TRAF2Q12933 501 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 SETMARQ53H47 684 aaPredicted RBP13.12□□□□□ -0.31
HDAC7-201ENST00000080059 SDE2Q6IQ49 451 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 HORMAD1Q86X24 394 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 CENPLQ8N0S6 344 aaPredicted RBP13.12□□□□□ -0.31
HDAC7-201ENST00000080059 ELMO1Q92556 727 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 ANKRD27Q96NW4 1050 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 CXCL16Q9H2A7 254 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 EPB41L4BQ9H329 900 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 EGFL7Q9UHF1 273 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 DPP7Q9UHL4 492 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 CDK5RAP2Q96SN8 1893 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 SHANK3Q9BYB0 1731 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 NEDD8-MDP1E9PL57 170 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 SLC7A4O43246 635 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 SLC11A1P49279 550 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 IDH3AP50213 366 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 SLC7A2P52569 658 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 SQLEQ14534 574 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 LRRC23Q53EV4 343 aaPredicted RBP13.12□□□□□ -0.31
HDAC7-201ENST00000080059 BRSK1Q8TDC3 778 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 IGFLR1Q9H665 355 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 FKBPLQ9UIM3 349 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 LNPEPQ9UIQ6 1025 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 GNPTGQ9UJJ9 305 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 AP4S1Q9Y587 144 aa13.12□□□□□ -0.31
HDAC7-201ENST00000080059 ZNF839A8K0R7 811 aa13.11□□□□□ -0.31
HDAC7-201ENST00000080059 H3BMM5 538 aa13.11□□□□□ -0.31
HDAC7-201ENST00000080059 GLUD1P00367 558 aa13.11□□□□□ -0.31
HDAC7-201ENST00000080059 RALGPS1Q5JS13 557 aa13.11□□□□□ -0.31
HDAC7-201ENST00000080059 ATXN7L2Q5T6C5 722 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms