RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 KIAA1958Q8N8K9 716 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 MICAL1Q8TDZ2 1067 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 PDCD6IPQ8WUM4 868 aaKnown RBP14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 PIH1D2Q8WWB5 315 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 ISG20Q96AZ6 181 aaKnown RBP14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 SAMD11Q96NU1 681 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 TMEM237Q96Q45 408 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 GPAMQ9HCL2 828 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 TDP1Q9NUW8 608 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 TBC1D14Q9P2M4 693 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 LNPEPQ9UIQ6 1025 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 CCL26Q9Y258 94 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 K7ERQ8 282 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 FCHO1O14526 889 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 ZNF195O14628 629 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 HGSO14964 777 aaPredicted RBP14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 SMAD6O43541 496 aaKnown RBP14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 DLX3O60479 287 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 PAPLNO95428 1278 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 NQO1P15559 274 aaKnown RBP14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 CD9P21926 228 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 ATP5F1P24539 256 aaPredicted RBP14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 IRS1P35568 1242 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 PGGT1BP53609 377 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 CDKN2DP55273 166 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 PFKPQ01813 784 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 USP4Q13107 963 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 PITRM1Q5JRX3 1037 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 ATXN7L2Q5T6C5 722 aaPredicted RBP14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 KLC3Q6P597 504 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 OTUB2Q96DC9 234 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 CCDC126Q96EE4 140 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 MYO19Q96H55 970 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 AARSD1Q9BTE6 412 aaKnown RBP14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 SMG9Q9H0W8 520 aaKnown RBP14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 MARCOQ9UEW3 520 aaPredicted RBP14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 HS3ST2Q9Y278 367 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 NPHS1O60500 1241 aa14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 ZNF821O75541 412 aaPredicted RBP14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 HSPA4LO95757 839 aa14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 IGSF6O95976 241 aa14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 SERPINA6P08185 405 aa14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 EPCAMP16422 314 aa14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 PMLP29590 882 aa14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 SLC8A1P32418 973 aa14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 GLRBP48167 497 aa14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 TIAL1Q01085 375 aaKnown RBP eCLIP14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 TUBB3Q13509 450 aa14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 RCN2Q14257 317 aa14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 CSHL1Q14406 222 aa14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 DMC1Q14565 340 aa14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 TBCCQ15814 346 aa14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 ZNF77Q15935 545 aa14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 SLC5A9Q2M3M2 681 aa14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 RIN3Q8TB24 985 aa14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 LPGAT1Q92604 370 aa14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 BHMTQ93088 406 aa14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 MCOLN1Q9GZU1 580 aa14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 CDH19Q9H159 772 aa14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 PNPOQ9NVS9 261 aa14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 POLR3BQ9NW08 1133 aaPredicted RBP14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 PLK2Q9NYY3 685 aa14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 IL17CQ9P0M4 197 aa14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 RAP2CQ9Y3L5 183 aa14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 ZNF711Q9Y462 761 aa14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 PCDHB9Q9Y5E1 797 aa14.31□□□□□ -0.12
RTFDC1-201ENST00000023939 CAPN14A8MX76 684 aa14.3□□□□□ -0.12
RTFDC1-201ENST00000023939 ZNF197O14709 1029 aa14.3□□□□□ -0.12
RTFDC1-201ENST00000023939 PFDN6O15212 129 aa14.3□□□□□ -0.12
RTFDC1-201ENST00000023939 STX7O15400 261 aaKnown RBP14.3□□□□□ -0.12
RTFDC1-201ENST00000023939 ARHGEF15O94989 841 aa14.3□□□□□ -0.12
RTFDC1-201ENST00000023939 CCDC166P0CW27 439 aa14.3□□□□□ -0.12
RTFDC1-201ENST00000023939 KITP10721 976 aa14.3□□□□□ -0.12
RTFDC1-201ENST00000023939 HLA-FP30511 346 aa14.3□□□□□ -0.12
RTFDC1-201ENST00000023939 HMGCLP35914 325 aa14.3□□□□□ -0.12
RTFDC1-201ENST00000023939 ABL2P42684 1182 aa14.3□□□□□ -0.12
RTFDC1-201ENST00000023939 BCL2L1Q07817 233 aa14.3□□□□□ -0.12
RTFDC1-201ENST00000023939 AARS2Q5JTZ9 985 aaKnown RBP14.3□□□□□ -0.12
RTFDC1-201ENST00000023939 TMEM207Q6UWW9 146 aa14.3□□□□□ -0.12
RTFDC1-201ENST00000023939 PIWIL4Q7Z3Z4 852 aaKnown RBP14.3□□□□□ -0.12
RTFDC1-201ENST00000023939 MAVSQ7Z434 540 aa14.3□□□□□ -0.12
RTFDC1-201ENST00000023939 OR2AP1Q8NGE2 309 aa14.3□□□□□ -0.12
RTFDC1-201ENST00000023939 SLC7A6OSQ96CW6 309 aaPredicted RBP14.3□□□□□ -0.12
RTFDC1-201ENST00000023939 PTCD3Q96EY7 689 aaKnown RBP14.3□□□□□ -0.12
RTFDC1-201ENST00000023939 TUBGCP5Q96RT8 1024 aa14.3□□□□□ -0.12
RTFDC1-201ENST00000023939 CEP44Q9C0F1 390 aa14.3□□□□□ -0.12
RTFDC1-201ENST00000023939 NMUR2Q9GZQ4 415 aa14.3□□□□□ -0.12
RTFDC1-201ENST00000023939 ILKAPQ9H0C8 392 aaPredicted RBP14.3□□□□□ -0.12
RTFDC1-201ENST00000023939 MARK1Q9P0L2 795 aa14.3□□□□□ -0.12
RTFDC1-201ENST00000023939 CRYL1Q9Y2S2 319 aa14.3□□□□□ -0.12
RTFDC1-201ENST00000023939 CBX6O95503 412 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 SRCP12931 536 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 SYN1P17600 705 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 TARSP26639 723 aaKnown RBP14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 WEE1P30291 646 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 TTPAP49638 278 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 EPHB1P54762 984 aa14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 ADARP55265 1226 aaKnown RBP14.29□□□□□ -0.12
RTFDC1-201ENST00000023939 KCNJ2P63252 427 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms