RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Grpel2O88396 224 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Cdc6O89033 562 aaKnown RBP9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Npr1P18293 1057 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Klrb1cP27814 223 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 HnrnpkP61979 463 aaKnown RBP9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Tcf7Q00417 419 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Fut7Q11131 389 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Vps41Q5KU39 853 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Taar6Q5QD13 345 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Dvl2Q60838 736 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Ddx19aQ61655 478 aaKnown RBP9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Rasl2-9Q61820 216 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Pdcd4Q61823 469 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Psg17Q62056 475 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 AgaQ64191 346 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Olfr1197Q7TR13 314 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Kctd9Q80UN1 339 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Camsap3Q80VC9 1252 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Psmd11Q8BG32 422 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Cdkl3Q8BLF2 595 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Lcmt2Q8BYR1 686 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 AcppQ8CE08 381 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Dusp15Q8R4V2 235 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Acer2Q8VD53 275 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Olfr352Q8VGJ9 315 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 GckrQ91X44 587 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Pcdhgb5Q91XX5 926 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Pcdha6Q91Y14 946 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Prelid3bQ9CYY7 195 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Tstd3Q9D0B5 157 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Cby1Q9D1C2 127 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Map3k6Q9WTR2 1291 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Tnfrsf14A0A1W2P7D5 276 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Cyp3a59D3Z2W7 503 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Gm21915J3QPM7 133 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Fam71e2L7N480 754 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Serpinb9eO08806 377 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Pcgf2P23798 342 aaKnown RBP9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 BrafP28028 804 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Htr7P32304 448 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Ccr1l1P51676 356 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 CebpaP53566 359 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Pcif1P59114 706 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Hoxb13P70321 286 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Cct3P80318 545 aaKnown RBP9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Gal3st2cQ3ULK5 396 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Tsr3Q5HZH2 323 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Ces1eQ64176 562 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Spred3Q6P6N5 408 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Tha1Q6XPS7 400 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Olfr832Q7TRG9 312 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Igsf5Q7TSN7 370 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Lca5Q80ST9 704 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Lrrc15Q80X72 579 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Efcab14Q8BGQ6 484 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Phf21bQ8C966 487 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Il17rdQ8JZL1 738 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Acad9Q8JZN5 625 aaKnown RBP9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Chrna3Q8R4G9 499 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Olfr1387Q8VFA9 311 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 DarsQ922B2 501 aaKnown RBP9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Dqx1Q924H9 718 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Coro7Q9D2V7 922 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Actrt1Q9D9J3 376 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Dtd1Q9DD18 209 aaKnown RBP9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Rapgef4Q9EQZ6 1011 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 NgbQ9ER97 151 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Smpd3Q9JJY3 655 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 DgkeQ9R1C6 564 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Zbtb18Q9WUK6 522 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Uhrf1bp1B2KF50 1429 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Zbtb21E9Q444 1094 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Gm17093F6XGJ4 214 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Sgo2bJ3QMK1 1167 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Gm16427J3QN52 483 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Gm9602J3QPD5 205 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Sec22bO08547 215 aaKnown RBP9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Ptpn9O35239 593 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 CkmP07310 381 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 PrkchP23298 683 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 NyxP83503 476 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 AdmP97297 184 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Tarbp2P97473 365 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Specc1lQ2KN98 1118 aaKnown RBP9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Esyt2Q3TZZ7 845 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Otud5Q3U2S4 566 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Fam196aQ3USH1 422 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Fut10Q5F2L2 481 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 UrgcpQ5NCI0 926 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Lag3Q61790 521 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 SnrpaQ62189 287 aaKnown RBP9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Cnga2Q62398 664 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Zswim9Q6DI92 447 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Clca4aQ6Q473 924 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Glis3Q6XP49 780 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Tas2r124Q7M718 309 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Pcdhb13Q91Y06 796 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Slc31a2Q9CPU9 143 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Twsg1Q9EP52 222 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Oxct2bQ9ESL0 520 aa9.09□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 34.2 ms