RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Mrpl45Q9D0Q7 306 aaKnown RBP17.38■□□□□ 0.37
Usp48-201ENSMUST00000055131 Glipr1l1Q9DAG6 236 aa17.38■□□□□ 0.37
Usp48-201ENSMUST00000055131 Sae1Q9R1T2 350 aa17.38■□□□□ 0.37
Usp48-201ENSMUST00000055131 Esp31A8R0W3 114 aa17.38■□□□□ 0.37
Usp48-201ENSMUST00000055131 ZyxQ62523 564 aa17.38■□□□□ 0.37
Usp48-201ENSMUST00000055131 Scaf4Q6PFF0 1209 aaKnown RBP17.38■□□□□ 0.37
Usp48-201ENSMUST00000055131 Olfr295Q7TS08 309 aa17.38■□□□□ 0.37
Usp48-201ENSMUST00000055131 Wasf2Q8BH43 497 aa17.38■□□□□ 0.37
Usp48-201ENSMUST00000055131 Pcdhb13Q91Y06 796 aa17.38■□□□□ 0.37
Usp48-201ENSMUST00000055131 Tcea2Q9QVN7 299 aa17.38■□□□□ 0.37
Usp48-201ENSMUST00000055131 PdgfaP20033 211 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Cyp4f37Q3V1F1 546 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Nxpe4Q52KP5 543 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Cd34Q64314 382 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Slc43a1Q8BSM7 564 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Exosc4Q921I9 245 aaKnown RBP17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Rasgef1cQ9D300 466 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Msl3Q9WVG9 525 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Hist1h2abC0HKE1 130 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Hist1h2acC0HKE2 130 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Hist1h2adC0HKE3 130 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Hist1h2aeC0HKE4 130 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Hist1h2agC0HKE5 130 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Hist1h2aiC0HKE6 130 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Hist1h2anC0HKE7 130 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Hist1h2aoC0HKE8 130 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Hist1h2apC0HKE9 130 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Barx2O08686 283 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Shmt1P50431 478 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Defb34Q7TNV8 81 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Hist3h2aQ8BFU2 130 aaKnown RBP17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Slitrk6Q8C110 840 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Hist1h2afQ8CGP5 130 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Hist1h2ahQ8CGP6 128 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Hist1h2akQ8CGP7 130 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 H2afjQ8R1M2 129 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Rsl24d1Q99L28 163 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Clcn2Q9R0A1 908 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Ssxb6A2BI74 170 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Mmp3P28862 477 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Atp6v0d1P51863 351 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Arf4P61750 180 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 ErfP70459 551 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Rnf180Q3U827 592 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Tapt1Q4VBD2 564 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Mcph1Q7TT79 822 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Mterf2Q8BKY8 385 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Prmt5Q8CIG8 637 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Bloc1s5Q8R015 185 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Evi2bQ8VD58 444 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Olfr356Q8VFP5 315 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Znf622Q91VY9 476 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Mapk8Q91Y86 384 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Dcp2Q9CYC6 422 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 LipaQ9Z0M5 397 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Aldoart1A6ZI46 419 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Ccnd3P30282 292 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Rplp2P99027 115 aaKnown RBP17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Ankrd27Q3UMR0 1048 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Q810S2 196 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Slc9a9Q8BZ00 644 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Ccdc28bQ8CEG5 200 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Setd7Q8VHL1 366 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Ergic2Q9CR89 377 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Slc5a3Q9JKZ2 718 aa17.37■□□□□ 0.37
Usp48-201ENSMUST00000055131 Cntnap3E9PY62 1287 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Pitpnm1O35954 1243 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Anxa6P14824 673 aaKnown RBP17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Prim2P33610 505 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Q5EBG8 199 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Mef2dQ63943 514 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Nat14Q8BVG8 206 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Cdhr5Q8VHF2 831 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 March2Q99M02 246 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Hnrnpa0Q9CX86 305 aaKnown RBP17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Tmbim4Q9DA39 238 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 PpieQ9QZH3 301 aaKnown RBP17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Gm20509G3UZF1 325 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Irf3P70671 419 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Etaa1Q5SVT3 877 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Smad3Q8BUN5 425 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Nae1Q8VBW6 534 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Myl9Q9CQ19 172 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 4930524N10RikQ9D519 233 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Acox2Q9QXD1 681 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Arrdc4A0A0B4J1F4 415 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Gm13089A2AGW7 455 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Ism2D3Z6A3 493 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Gm21293E9Q4G9 266 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Fam181aJ3QNB7 292 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Sypl2O89104 264 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Irf1P15314 329 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 ChgbP16014 677 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Gal3st3P61315 431 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Smpdl3aP70158 445 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Rabl6Q5U3K5 725 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Psd2Q6P1I6 770 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Olfr798Q7TRH8 311 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 Ahcyl1Q80SW1 530 aa17.36■□□□□ 0.37
Usp48-201ENSMUST00000055131 OlahQ8R197 265 aa17.36■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms