RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Nos1apQ9D3A8 503 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 IcmtQ9EQK7 283 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 AfdnQ9QZQ1 1820 aaKnown RBP9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Klhl32A2AJX0 620 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 C87414E9PWI7 475 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Cyp2b23E9Q593 491 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Serpinb9cI7HJI5 387 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Vmn2r31L7N1Z4 861 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Cyp27b1O35084 507 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 EgfP01132 1217 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Lamp2P17047 415 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Cdh5P55284 784 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Cntn3Q07409 1028 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Echdc2Q3TLP5 296 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Mrm3Q5ND52 418 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Atp2c1Q80XR2 918 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 UstQ8BUB6 407 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 4931406P16RikQ8C5X1 1059 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Smco1Q8CEZ1 214 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 PacrglQ9D3X5 248 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Rin2Q9D684 903 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Prmt2Q9R144 448 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Smarcb1Q9Z0H3 385 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Gm42688A0A0R3P9D1 673 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Fpr-rs4A4FUQ5 323 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Tatdn2B7ZNL9 783 aaKnown RBP9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Sgo2bJ3QMK1 1167 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Mtnd4P03911 459 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Dlg3P70175 849 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Cyp2c65Q148B1 490 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Dennd1bQ3U1T9 766 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Zmym5Q3U2E2 627 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Nutm2Q3V0C3 733 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Ampd1Q3V1D3 745 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Acvrl1Q61288 502 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Slc20a1Q61609 681 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Znf512Q69Z99 562 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Znf513Q6PD29 541 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Bend6Q6PFX2 281 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Pcdh20Q8BIZ0 952 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Tbc1d17Q8BYH7 645 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Ccdc142Q8CAI1 738 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Ifnl3Q8CGK6 193 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Stk32cQ8QZV4 488 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Fbxo21Q8VDH1 627 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Olfr809Q8VEX8 328 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Olfr1353Q8VGU8 309 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Pcdhb13Q91Y06 796 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Cpxm2Q9D2L5 764 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Dhx34Q9DBV3 1145 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 RhoaQ9QUI0 193 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Mid2Q9QUS6 705 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Gm4450E9Q007 373 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Calhm3J3QMI4 347 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Tnfrsf11aO35305 625 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 ItgavP43406 1044 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Lypla1P97823 230 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 ArvcfP98203 962 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 UcmaQ14BU0 138 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Grik5Q61626 979 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Hsd3b4Q61767 373 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Mis18bp1Q80WQ8 998 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Cyp2d26Q8CIM7 500 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Slc35f5Q8R314 524 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Slc30a5Q8R4H9 761 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Golm1Q91XA2 393 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 CrebzfQ91ZR3 358 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Eif2b2Q99LD9 351 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Gpihbp1Q9D1N2 228 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Krt81Q9ERE2 481 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Kat2aQ9JHD2 830 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Kcnq4Q9JK97 696 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 IkbkeQ9R0T8 717 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Kif28pD3YXS5 1028 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Gm7535F7CXE4 302 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Matn2O08746 956 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Grpel2O88396 224 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Pabpc1P29341 636 aaKnown RBP9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 DbtP53395 482 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Usp46P62069 366 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Ctps2P70303 586 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 MylpfP97457 169 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 BC030870Q3V2G4 71 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Papss1Q60967 624 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Vsx2Q61412 361 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Pde1aQ61481 565 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Arl5cQ6P068 179 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Olfr169Q7TS53 313 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Arhgef33Q8BW86 850 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Lpcat2Q8BYI6 544 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Aqp12Q8CHJ2 290 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Mark4Q8CIP4 752 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Kctd15Q8K0E1 283 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 LipmQ8K2A6 422 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Setd7Q8VHL1 366 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Ifrd2Q9D8U0 441 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Dyrk1bQ9Z188 629 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Rpl9-ps1S4R1R7 191 aa9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Nup98Q6PFD9 1816 aaKnown RBP9.94□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Zfp985A2A7A5 519 aa9.94□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 66.5 ms