RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Arhgap28Q8BN58 729 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Rab36Q8CAM5 267 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Zswim3Q8CFL8 695 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Tada2aQ8CHV6 443 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Alpk2Q91ZB0 2144 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Zfp655Q9CZP3 541 aaKnown RBP16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Cdkn2aipnlQ9D211 116 aaKnown RBP16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Syvn1Q9DBY1 612 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Tlr6Q9EPW9 795 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 PyglQ9ET01 850 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Spag4Q9JJF2 443 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Gm3739L7N296 216 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Sh3pxd2aO89032 1124 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Sult1e1P49891 295 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Gp1bbP56400 206 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Cntn2Q61330 1040 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Olfr1062Q7TR71 315 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Trit1Q80UN9 467 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Grsf1Q8C5Q4 479 aaKnown RBP16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 ThtpaQ8JZL3 224 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Olfr1352Q8VGX5 309 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 OptcQ920A0 328 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Rsl24d1Q99L28 163 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 MydgfQ9CPT4 166 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Retreg3Q9CQV4 466 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 SgshQ9EQ08 502 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Stx12Q9ER00 274 aa16.46■□□□□ 0.23
Shh-201ENSMUST00000002708 Gm43518A0A0G2JGB6 165 aa16.46■□□□□ 0.22
Shh-201ENSMUST00000002708 Gm45233A0A0N4SVE0 221 aa16.46■□□□□ 0.22
Shh-201ENSMUST00000002708 Olfr839-ps1A0A1D5RMH6 312 aa16.46■□□□□ 0.22
Shh-201ENSMUST00000002708 1700001O22RikA2APZ1 375 aa16.46■□□□□ 0.22
Shh-201ENSMUST00000002708 Vmn2r74E9PW21 853 aa16.46■□□□□ 0.22
Shh-201ENSMUST00000002708 DdcO88533 480 aa16.46■□□□□ 0.22
Shh-201ENSMUST00000002708 Gpc4P51655 557 aa16.46■□□□□ 0.22
Shh-201ENSMUST00000002708 PrkcgP63318 697 aa16.46■□□□□ 0.22
Shh-201ENSMUST00000002708 Clec4fP70194 548 aa16.46■□□□□ 0.22
Shh-201ENSMUST00000002708 Akr1c6P70694 323 aa16.46■□□□□ 0.22
Shh-201ENSMUST00000002708 ItkQ03526 625 aa16.46■□□□□ 0.22
Shh-201ENSMUST00000002708 Serpina12Q7TMF5 413 aa16.46■□□□□ 0.22
Shh-201ENSMUST00000002708 InavaQ7TN12 663 aa16.46■□□□□ 0.22
Shh-201ENSMUST00000002708 Gpr139Q80UC8 345 aa16.46■□□□□ 0.22
Shh-201ENSMUST00000002708 Ldhal6bQ8BVP2 382 aa16.46■□□□□ 0.22
Shh-201ENSMUST00000002708 Slco2b1Q8BXB6 683 aa16.46■□□□□ 0.22
Shh-201ENSMUST00000002708 Smim11aQ99J19 55 aa16.46■□□□□ 0.22
Shh-201ENSMUST00000002708 Anxa13Q99JG3 317 aa16.46■□□□□ 0.22
Shh-201ENSMUST00000002708 Pmf1Q9CPV5 202 aa16.46■□□□□ 0.22
Shh-201ENSMUST00000002708 Trmt11Q9CWH5 460 aa16.46■□□□□ 0.22
Shh-201ENSMUST00000002708 Morf4l2Q9R0Q4 288 aa16.46■□□□□ 0.22
Shh-201ENSMUST00000002708 Racgap1Q9WVM1 628 aa16.46■□□□□ 0.22
Shh-201ENSMUST00000002708 Zscan12Q9Z1D7 501 aa16.46■□□□□ 0.22
Shh-201ENSMUST00000002708 Larp7Q05CL8 570 aaKnown RBP16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 Nat9Q3UG98 241 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 Nrg1Q6DR99 700 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 Q6GQU0 248 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 Ip6k1Q6PD10 433 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 Zcchc4Q8BKW4 512 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 Slc5a9Q8VDT1 685 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 Mospd1Q8VEL0 213 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 DtnaQ9D2N4 746 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 D7h11orf16Q9JJR6 402 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 Hao2Q9NYQ2 353 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 Cyp4a12bA2A974 508 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 Aldoart1A6ZI46 419 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 Ceacam3E9Q6J4 706 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 KlO35082 1014 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 Ap3d1O54774 1199 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 PolP11369 1281 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 Il1rl1P14719 567 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 SagP20443 403 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 Eci1P42125 289 aaKnown RBP16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 GemP55041 295 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 Axdnd1Q3UZ57 424 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 Rab26Q504M8 260 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 Tecpr1Q80VP0 1166 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 Tmcc2Q80W04 706 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 SvopQ8BFT9 548 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 Pcdh20Q8BIZ0 952 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 Metap1Q8BP48 386 aaKnown RBP16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 Cyp4a12aQ91WL5 508 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 Crtc3Q91X84 619 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 Stard13Q923Q2 1113 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 Dhrs1Q99L04 313 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 Nudt7Q99P30 236 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 Ten1Q9D7K2 161 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 Pidd1Q9ERV7 915 aa16.45■□□□□ 0.22
Shh-201ENSMUST00000002708 Vmn1r76F8VQ63 324 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Dync1i2O88487 612 aaKnown RBP16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Man1a1P45700 655 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 NadkP58058 439 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Brms1lQ3U1T3 323 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 UrgcpQ5NCI0 926 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Hspa1aQ61696 641 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Jak2Q62120 1129 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Six3Q62233 333 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Cntn4Q69Z26 1026 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Naaladl1Q7M758 745 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Pnma8aQ80VM8 430 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Ctxn3Q8BXZ0 80 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Vps26bQ8C0E2 336 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Erich5Q8K0S2 362 aa16.44■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms