RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 RIMKLBQ9ULI2 386 aa17.64■□□□□ 0.41
PHGDH-232ENST00000641947 ANTXRLA6NF34 631 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 A6NNZ2 444 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 SOCS5O75159 536 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 RPP40O75818 363 aaKnown RBP17.63■□□□□ 0.41
PHGDH-232ENST00000641947 GOT2P00505 430 aaKnown RBP17.63■□□□□ 0.41
PHGDH-232ENST00000641947 FOXN2P32314 431 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 ETV4P43268 484 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 MAPK8P45983 427 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 GRIA4P48058 902 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 CSRP3P50461 194 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 PDGFRLQ15198 375 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 TUBB8Q3ZCM7 444 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 LVRNQ6Q4G3 990 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 SPNS2Q8IVW8 549 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 NDUFAF2Q8N183 169 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 OR6P1Q8NGX9 317 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 CKAP2Q8WWK9 683 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 SGSM3Q96HU1 749 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 ZNF317Q96PQ6 595 aaPredicted RBP17.63■□□□□ 0.41
PHGDH-232ENST00000641947 GPR22Q99680 433 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 SLC13A1Q9BZW2 595 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 EPN3Q9H201 632 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 RHOJQ9H4E5 214 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 ZDHHC6Q9H6R6 413 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 NSMCE4AQ9NXX6 385 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 PLXNB3Q9ULL4 1909 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 COPEO14579 308 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 HAUS5O94927 633 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 ZWINTO95229 277 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 CRTAMO95727 393 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 PRAMEP78395 509 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 PDE1BQ01064 536 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 DNAJC3Q13217 504 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 CNSTQ6PJW8 725 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 LYSMD3Q7Z3D4 306 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 CILP2Q8IUL8 1156 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 ZNF366Q8N895 744 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 ECHDC3Q96DC8 303 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 CDKN2AIPNLQ96HQ2 116 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 THG1LQ9NWX6 298 aaKnown RBP17.63■□□□□ 0.41
PHGDH-232ENST00000641947 ZNF711Q9Y462 761 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 COL4A2P08572 1712 aa17.63■□□□□ 0.41
PHGDH-232ENST00000641947 A0A0J9YYE9 177 aa17.62■□□□□ 0.41
PHGDH-232ENST00000641947 TIMM44O43615 452 aa17.62■□□□□ 0.41
PHGDH-232ENST00000641947 TRBC1P01850 177 aa17.62■□□□□ 0.41
PHGDH-232ENST00000641947 SERPINA4P29622 427 aa17.62■□□□□ 0.41
PHGDH-232ENST00000641947 OPRD1P41143 372 aa17.62■□□□□ 0.41
PHGDH-232ENST00000641947 EPHB1P54762 984 aa17.62■□□□□ 0.41
PHGDH-232ENST00000641947 LAMB3Q13751 1172 aa17.62■□□□□ 0.41
PHGDH-232ENST00000641947 CDKN3Q16667 212 aa17.62■□□□□ 0.41
PHGDH-232ENST00000641947 LRIT3Q3SXY7 679 aa17.62■□□□□ 0.41
PHGDH-232ENST00000641947 WFIKKN2Q8TEU8 576 aa17.62■□□□□ 0.41
PHGDH-232ENST00000641947 DYDC1Q8WWB3 177 aa17.62■□□□□ 0.41
PHGDH-232ENST00000641947 ELSPBP1Q96BH3 223 aa17.62■□□□□ 0.41
PHGDH-232ENST00000641947 FAM111AQ96PZ2 611 aa17.62■□□□□ 0.41
PHGDH-232ENST00000641947 PAIP2Q9BPZ3 127 aaKnown RBP17.62■□□□□ 0.41
PHGDH-232ENST00000641947 BPIFA1Q9NP55 256 aa17.62■□□□□ 0.41
PHGDH-232ENST00000641947 TM9SF1O15321 606 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 UGT2B4P06133 528 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 DLDP09622 509 aaKnown RBP17.61■□□□□ 0.41
PHGDH-232ENST00000641947 DHRS4L1P0CG22 281 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 SERPINB8P50452 374 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 SEMG2Q02383 582 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 RUNX3Q13761 415 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 GRAMD4Q6IC98 578 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 TAX1BP1Q86VP1 789 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 SLC41A1Q8IVJ1 513 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 RIPOR3Q96MK2 946 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 CPEB1Q9BZB8 566 aaKnown RBP17.61■□□□□ 0.41
PHGDH-232ENST00000641947 ELOVL2Q9NXB9 296 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 FKBPLQ9UIM3 349 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 EMCNQ9ULC0 261 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 PLLPQ9Y342 182 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 WASF2Q9Y6W5 498 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 LRRK1Q38SD2 2015 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 GMNCA6NCL1 334 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 C2orf81A6NN90 581 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 SRRM3A6NNA2 597 aaPredicted RBP17.61■□□□□ 0.41
PHGDH-232ENST00000641947 WASH3PC4AMC7 463 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 ARNTLO00327 626 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 S1PR4O95977 384 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 CTSLP07711 333 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 PSMC3P17980 439 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 LPOP22079 712 aaPredicted RBP17.61■□□□□ 0.41
PHGDH-232ENST00000641947 GJA4P35212 333 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 HNF1BP35680 557 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 LEPRP48357 1165 aaKnown RBP17.61■□□□□ 0.41
PHGDH-232ENST00000641947 CD151P48509 253 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 RPL26P61254 145 aaKnown RBP17.61■□□□□ 0.41
PHGDH-232ENST00000641947 IRF9Q00978 393 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 RBM20Q5T481 1227 aaKnown RBP17.61■□□□□ 0.41
PHGDH-232ENST00000641947 KIAA0408Q6ZU52 694 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 PLD6Q8N2A8 252 aaKnown RBP17.61■□□□□ 0.41
PHGDH-232ENST00000641947 OTUD6BQ8N6M0 293 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 SMRP1Q8NCR6 262 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 GRIN3AQ8TCU5 1115 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 ACMSDQ8TDX5 336 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 SPOCK2Q92563 424 aa17.61■□□□□ 0.41
PHGDH-232ENST00000641947 TUBGCP5Q96RT8 1024 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms