RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 ETNK1Q9HBU6 452 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 EPB41L5Q9HCM4 733 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 ZDHHC4Q9NPG8 344 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 GDF3Q9NR23 364 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 SLCO3A1Q9UIG8 710 aa9.48□□□□□ -0.89
PHGDH-228ENST00000641847 TPX2Q9ULW0 747 aaKnown RBP9.48□□□□□ -0.89
PHGDH-228ENST00000641847 USP9XQ93008 2570 aaPredicted RBP9.47□□□□□ -0.89
PHGDH-228ENST00000641847 TCRBV7S3A2A0A539 114 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 GOLGA6CA6NDK9 693 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 GOLGA6BA6NDN3 693 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 ANTXRLA6NF34 631 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 TTC34A8MYJ7 566 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 BHMG1C9JSJ3 638 aaPredicted RBP9.47□□□□□ -0.89
PHGDH-228ENST00000641847 E7EVH7 732 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 NDC80O14777 642 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 BCAT2O15382 392 aaPredicted RBP9.47□□□□□ -0.89
PHGDH-228ENST00000641847 ZNF821O75541 412 aaPredicted RBP9.47□□□□□ -0.89
PHGDH-228ENST00000641847 TMEM63AO94886 807 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 DKK1O94907 266 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 GOLGA6DP0CG33 693 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 JUPP14923 745 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 CR2P20023 1033 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 IVDP26440 423 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 CD86P42081 329 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 IL12RB1P42701 662 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 GRK6P43250 576 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 LMAN1P49257 510 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 ITGA8P53708 1063 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 SNRPD1P62314 119 aaKnown RBP9.47□□□□□ -0.89
PHGDH-228ENST00000641847 NIPAL4Q0D2K0 466 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 CALCOCO2Q13137 446 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 ZNF234Q14588 700 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 KCNJ11Q14654 390 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 NAA30Q147X3 362 aaPredicted RBP9.47□□□□□ -0.89
PHGDH-228ENST00000641847 TRADDQ15628 312 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 DLG2Q15700 870 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 HLA-BQ31612 363 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 RNASEH2BQ5TBB1 312 aaKnown RBP9.47□□□□□ -0.89
PHGDH-228ENST00000641847 ANKRD22Q5VYY1 191 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 SERPINA13PQ6UXR4 307 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 PRPF39Q86UA1 669 aaKnown RBP9.47□□□□□ -0.89
PHGDH-228ENST00000641847 PPIL6Q8IXY8 311 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 IFT20Q8IY31 132 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 CHPFQ8IZ52 775 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 RYBPQ8N488 228 aaPredicted RBP9.47□□□□□ -0.89
PHGDH-228ENST00000641847 ZNF366Q8N895 744 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 KDM1BQ8NB78 822 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 BBOF1Q8ND07 529 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 IPMKQ8NFU5 416 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 OR2AP1Q8NGE2 309 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 OR6K2Q8NGY2 324 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 SPATA22Q8NHS9 363 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 ARRDC2Q8TBH0 407 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 FRS2Q8WU20 508 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 IFT81Q8WYA0 676 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 CPT1BQ92523 772 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 ISG20Q96AZ6 181 aaKnown RBP9.47□□□□□ -0.89
PHGDH-228ENST00000641847 IMP4Q96G21 291 aaKnown RBP9.47□□□□□ -0.89
PHGDH-228ENST00000641847 WBP1Q96G27 269 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 OXNAD1Q96HP4 312 aaPredicted RBP9.47□□□□□ -0.89
PHGDH-228ENST00000641847 PPP1R2P1Q96PQ5 205 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 NUDCD1Q96RS6 583 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 RBM15Q96T37 977 aaKnown RBP eCLIP9.47□□□□□ -0.89
PHGDH-228ENST00000641847 EIF2B3Q9NR50 452 aaKnown RBP9.47□□□□□ -0.89
PHGDH-228ENST00000641847 FAM114A2Q9NRY5 505 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 IGSF5Q9NSI5 407 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 GOLGA6AQ9NYA3 693 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 GRHL1Q9NZI5 618 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 UBP1Q9NZI7 540 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 WHRNQ9P202 907 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 THAP10Q9P2Z0 257 aaPredicted RBP9.47□□□□□ -0.89
PHGDH-228ENST00000641847 HCN2Q9UL51 889 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 PLA2G4CQ9UP65 541 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 SSUH2Q9Y2M2 353 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 AAR2Q9Y312 384 aaKnown RBP9.47□□□□□ -0.89
PHGDH-228ENST00000641847 STARD13Q9Y3M8 1113 aa9.47□□□□□ -0.89
PHGDH-228ENST00000641847 FARP1Q9Y4F1 1045 aaPredicted RBP9.47□□□□□ -0.89
PHGDH-228ENST00000641847 TEX15Q9BXT5 2789 aa9.46□□□□□ -0.89
PHGDH-228ENST00000641847 KNTC1P50748 2209 aa9.46□□□□□ -0.89
PHGDH-228ENST00000641847 EDDM13A0A1B0GTR0 161 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 PLK4O00444 970 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 INSIG1O15503 277 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 BNIP3LO60238 219 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 ANXA9O76027 345 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 AP2A1O95782 977 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 MT-CYBP00156 380 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-228ENST00000641847 APRTP07741 180 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 MMP2P08253 660 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 NDUFV2P19404 249 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 ITIH2P19823 946 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 TPSB2P20231 275 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 PRKCHP24723 683 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 MAOBP27338 520 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 CD6P30203 668 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 MAGEA6P43360 314 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 RECQLP46063 649 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-228ENST00000641847 SCNN1BP51168 640 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 CCNHP51946 323 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-228ENST00000641847 GEMP55040 296 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 AP1S1P61966 158 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms