RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 GRTP1Q5TC63 336 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 GRAMD4Q6IC98 578 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 PARM1Q6UWI2 310 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 CAMK1DQ8IU85 385 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 ETFBKMTQ8IXQ9 262 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 SLC44A3Q8N4M1 653 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 CPA6Q8N4T0 437 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 MDM1Q8TC05 714 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 BRSK1Q8TDC3 778 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 CYB5D2Q8WUJ1 264 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 ELSPBP1Q96BH3 223 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 MYO19Q96H55 970 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 SMC6Q96SB8 1091 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 AGAP2Q99490 1192 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 CPNE1Q99829 537 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 RTKNQ9BST9 563 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 KCNK9Q9NPC2 374 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.16□□□□□ -0.3
PHGDH-221ENST00000641573 TXNDC16Q9P2K2 825 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 SLC27A6Q9Y2P4 619 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 KCTD3Q9Y597 815 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 PSAT1Q9Y617 370 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 BAHCC1Q9P281 2608 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 CFAP47Q6ZTR5 3102 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 OTOL1A6NHN0 477 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-221ENST00000641573 ANKRD66B4E2M5 251 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 GOLGA8TH3BQL2 631 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 LAMTOR5O43504 91 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 SOCS5O75159 536 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 ECI2O75521 394 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 PGLSO95336 258 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 PIGNO95427 931 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 ASLP04424 464 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 ATP5BP06576 529 aaKnown RBP13.15□□□□□ -0.3
PHGDH-221ENST00000641573 PSMC3P17980 439 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 CNTFP26441 200 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 ARNTP27540 789 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 GKP32189 559 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 SLC8A1P32418 973 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 GP5P40197 560 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 MDH1P40925 334 aaKnown RBP13.15□□□□□ -0.3
PHGDH-221ENST00000641573 RUNX3Q13761 415 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 THOC5Q13769 683 aaKnown RBP13.15□□□□□ -0.3
PHGDH-221ENST00000641573 BMPR2Q13873 1038 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 STRA8Q7Z7C7 330 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 C4orf33Q8N1A6 199 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 TTC8Q8TAM2 541 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 SORCS1Q8WY21 1168 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 MTBPQ96DY7 904 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 SHDQ96IW2 340 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 SERAC1Q96JX3 654 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 MRGPRX3Q96LB0 322 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 SMIM14Q96QK8 99 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 CAPS2Q9BXY5 557 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 CIPCQ9C0C6 399 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 ATP13A3Q9H7F0 1226 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 NSMCE4AQ9NXX6 385 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 DLGAP2Q9P1A6 1054 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 DEC1Q9P2X7 70 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 HECAQ9UBI9 543 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-221ENST00000641573 RIMKLBQ9ULI2 386 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 PCDHB9Q9Y5E1 797 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 ARL5AQ9Y689 179 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 USP24Q9UPU5 2620 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 MIA3Q5JRA6 1907 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 FANCMQ8IYD8 2048 aa13.15□□□□□ -0.3
PHGDH-221ENST00000641573 MYOFQ9NZM1 2061 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 GPR179Q6PRD1 2367 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 MYLKQ15746 1914 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 TMEM120BA0PK00 339 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 HMX2A2RU54 273 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 DCDC2BA2VCK2 349 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 TRAFD1O14545 582 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-221ENST00000641573 HTRA2O43464 458 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-221ENST00000641573 BNIP3LO60238 219 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 SIN3BO75182 1162 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 SPAG7O75391 227 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 POP4O95707 220 aaKnown RBP13.14□□□□□ -0.31
PHGDH-221ENST00000641573 CRTAMO95727 393 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 SRPRAP08240 638 aaKnown RBP13.14□□□□□ -0.31
PHGDH-221ENST00000641573 ADRB1P08588 477 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 DLDP09622 509 aaKnown RBP13.14□□□□□ -0.31
PHGDH-221ENST00000641573 CHN1P15882 459 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 KRT4P19013 534 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 SERPINA4P29622 427 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 GDI1P31150 447 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 NNMTP40261 264 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 ABL2P42684 1182 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 GRIA4P48058 902 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 VASPP50552 380 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-221ENST00000641573 CCNHP51946 323 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-221ENST00000641573 EPHB1P54762 984 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 CSE1LP55060 971 aaKnown RBP13.14□□□□□ -0.31
PHGDH-221ENST00000641573 RPL26P61254 145 aaKnown RBP13.14□□□□□ -0.31
PHGDH-221ENST00000641573 GUCY1A3Q02108 690 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 ACVR1Q04771 509 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 KDSRQ06136 332 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 GABPB1Q06547 395 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-221ENST00000641573 TAF1AQ15573 450 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-221ENST00000641573 ZNF528Q3MIS6 628 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms