RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 LRRC10BA6NIK2 292 aa16.76■□□□□ 0.27
PHGDH-213ENST00000641272 DDX3XO00571 662 aaKnown RBP eCLIP16.76■□□□□ 0.277e-18■■■□□ 16.8
PHGDH-213ENST00000641272 PLD2O14939 933 aa16.76■□□□□ 0.27
PHGDH-213ENST00000641272 CPP00450 1065 aa16.76■□□□□ 0.27
PHGDH-213ENST00000641272 ITGA2BP08514 1039 aa16.76■□□□□ 0.27
PHGDH-213ENST00000641272 UGT1A5P35504 534 aa16.76■□□□□ 0.27
PHGDH-213ENST00000641272 CSNK1DP48730 415 aa16.76■□□□□ 0.27
PHGDH-213ENST00000641272 INHBCP55103 352 aa16.76■□□□□ 0.27
PHGDH-213ENST00000641272 SLC10A7Q0GE19 358 aa16.76■□□□□ 0.27
PHGDH-213ENST00000641272 SRSF6Q13247 344 aaKnown RBP16.76■□□□□ 0.27
PHGDH-213ENST00000641272 LBRQ14739 615 aaKnown RBP16.76■□□□□ 0.27
PHGDH-213ENST00000641272 AGERQ15109 404 aa16.76■□□□□ 0.27
PHGDH-213ENST00000641272 TMCO4Q5TGY1 634 aa16.76■□□□□ 0.27
PHGDH-213ENST00000641272 LVRNQ6Q4G3 990 aa16.76■□□□□ 0.27
PHGDH-213ENST00000641272 RAB11FIP2Q7L804 512 aa16.76■□□□□ 0.27
PHGDH-213ENST00000641272 FBXO39Q8N4B4 442 aa16.76■□□□□ 0.27
PHGDH-213ENST00000641272 FAM46DQ8NEK8 389 aa16.76■□□□□ 0.27
PHGDH-213ENST00000641272 HSPH1Q92598 858 aa16.76■□□□□ 0.27
PHGDH-213ENST00000641272 NUS1Q96E22 293 aa16.76■□□□□ 0.27
PHGDH-213ENST00000641272 LRRN3Q9H3W5 708 aa16.76■□□□□ 0.27
PHGDH-213ENST00000641272 ZWILCHQ9H900 591 aa16.76■□□□□ 0.27
PHGDH-213ENST00000641272 ETNK2Q9NVF9 386 aa16.76■□□□□ 0.27
PHGDH-213ENST00000641272 TMEM63CQ9P1W3 806 aa16.76■□□□□ 0.27
PHGDH-213ENST00000641272 ZNF462Q96JM2 2506 aa16.76■□□□□ 0.27
PHGDH-213ENST00000641272 HELZ2Q9BYK8 2649 aaKnown RBP16.76■□□□□ 0.27
PHGDH-213ENST00000641272 CFAP46Q8IYW2 2715 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 ARHGEF17Q96PE2 2063 aaPredicted RBP16.75■□□□□ 0.27
PHGDH-213ENST00000641272 GOLGA6CA6NDK9 693 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 GOLGA6BA6NDN3 693 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 EIF3CLB5ME19 914 aaKnown RBP16.75■□□□□ 0.27
PHGDH-213ENST00000641272 GOLGA6L22H0YM25 854 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 TRAFD1O14545 582 aaPredicted RBP16.75■□□□□ 0.27
PHGDH-213ENST00000641272 NOBOXO60393 691 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 FTLP02792 175 aaPredicted RBP16.75■□□□□ 0.27
PHGDH-213ENST00000641272 GOLGA6DP0CG33 693 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 SKILP12757 684 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 ITIH1P19827 911 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 IL1R2P27930 398 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 SLC5A2P31639 672 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 MAZP56270 477 aaKnown RBP16.75■□□□□ 0.27
PHGDH-213ENST00000641272 MAXP61244 160 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 AP1S1P61966 158 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 PTPRRQ15256 657 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 CNGA3Q16281 694 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 SPECC1LQ69YQ0 1117 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 PPP1R2P3Q6NXS1 205 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 CCDC81Q6ZN84 652 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 ZNF605Q86T29 641 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 LSM14AQ8ND56 463 aaKnown RBP16.75■□□□□ 0.27
PHGDH-213ENST00000641272 GPR156Q8NFN8 814 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 TTC9Q92623 222 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 EIF3CQ99613 913 aaKnown RBP16.75■□□□□ 0.27
PHGDH-213ENST00000641272 STRADBQ9C0K7 418 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 DPEP2Q9H4A9 486 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 RTN4Q9NQC3 1192 aaKnown RBP16.75■□□□□ 0.27
PHGDH-213ENST00000641272 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.75■□□□□ 0.27
PHGDH-213ENST00000641272 GOLGA6AQ9NYA3 693 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 SEPT3Q9UH03 358 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 MYO6Q9UM54 1294 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 LOXL2Q9Y4K0 774 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 PCDHGC4Q9Y5F7 938 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 DGKBQ9Y6T7 804 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 SCINQ9Y6U3 715 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 RNF215Q9Y6U7 377 aa16.75■□□□□ 0.27
PHGDH-213ENST00000641272 PRSS38A1L453 326 aa16.74■□□□□ 0.27
PHGDH-213ENST00000641272 H3BRJ5 948 aa16.74■□□□□ 0.27
PHGDH-213ENST00000641272 PYCARD-AS1I3L0S3 204 aa16.74■□□□□ 0.27
PHGDH-213ENST00000641272 JMJD7P0C870 316 aa16.74■□□□□ 0.27
PHGDH-213ENST00000641272 AMPD1P23109 780 aa16.74■□□□□ 0.27
PHGDH-213ENST00000641272 KLHL30Q0D2K2 578 aa16.74■□□□□ 0.27
PHGDH-213ENST00000641272 TRAF2Q12933 501 aa16.74■□□□□ 0.27
PHGDH-213ENST00000641272 RFTN1Q14699 578 aaPredicted RBP16.74■□□□□ 0.27
PHGDH-213ENST00000641272 TGIF1Q15583 401 aa16.74■□□□□ 0.27
PHGDH-213ENST00000641272 C14orf28Q4W4Y0 310 aa16.74■□□□□ 0.27
PHGDH-213ENST00000641272 CERCAMQ5T4B2 595 aa16.74■□□□□ 0.27
PHGDH-213ENST00000641272 SPRED1Q7Z699 444 aa16.74■□□□□ 0.27
PHGDH-213ENST00000641272 HEATR4Q86WZ0 1026 aa16.74■□□□□ 0.27
PHGDH-213ENST00000641272 PGBD5Q8N414 524 aa16.74■□□□□ 0.27
PHGDH-213ENST00000641272 PTCD2Q8WV60 388 aaKnown RBP16.74■□□□□ 0.27
PHGDH-213ENST00000641272 CCDC97Q96F63 343 aaPredicted RBP16.74■□□□□ 0.27
PHGDH-213ENST00000641272 PSKH2Q96QS6 385 aa16.74■□□□□ 0.27
PHGDH-213ENST00000641272 CARS2Q9HA77 564 aaKnown RBP16.74■□□□□ 0.27
PHGDH-213ENST00000641272 UNC13CQ8NB66 2214 aa16.74■□□□□ 0.27
PHGDH-213ENST00000641272 A0A0U1RQS6 177 aa16.73■□□□□ 0.27
PHGDH-213ENST00000641272 K7ENP7 123 aa16.73■□□□□ 0.27
PHGDH-213ENST00000641272 MBD3O95983 291 aa16.73■□□□□ 0.27
PHGDH-213ENST00000641272 LHCGRP22888 699 aa16.73■□□□□ 0.27
PHGDH-213ENST00000641272 KELP23276 732 aa16.73■□□□□ 0.27
PHGDH-213ENST00000641272 ETV5P41161 510 aa16.73■□□□□ 0.27
PHGDH-213ENST00000641272 MAP9Q49MG5 647 aa16.73■□□□□ 0.27
PHGDH-213ENST00000641272 TXNRD3NBQ6F5E7 133 aa16.73■□□□□ 0.27
PHGDH-213ENST00000641272 PNCKQ6P2M8 343 aa16.73■□□□□ 0.27
PHGDH-213ENST00000641272 INO80CQ6PI98 192 aaPredicted RBP16.73■□□□□ 0.27
PHGDH-213ENST00000641272 DOK6Q6PKX4 331 aa16.73■□□□□ 0.27
PHGDH-213ENST00000641272 TMCO3Q6UWJ1 677 aa16.73■□□□□ 0.27
PHGDH-213ENST00000641272 TMPRSS9Q7Z410 1059 aa16.73■□□□□ 0.27
PHGDH-213ENST00000641272 ATPAF2Q8N5M1 289 aa16.73■□□□□ 0.27
PHGDH-213ENST00000641272 FNIP1Q8TF40 1166 aa16.73■□□□□ 0.27
PHGDH-213ENST00000641272 BTBD6Q96KE9 485 aa16.73■□□□□ 0.27
PHGDH-213ENST00000641272 COQ10AQ96MF6 247 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms